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fixed dbxref type, added xref fixes #26086
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@pgaudet
pgaudet committed Sep 13, 2023
1 parent 865c9d4 commit 16c87e1
Showing 1 changed file with 8 additions and 3 deletions.
11 changes: 8 additions & 3 deletions src/ontology/go-edit.obo
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Expand Up @@ -437891,12 +437891,13 @@ name: tRNA (cytidine(32)-2'-O)-methyltransferase activity
namespace: molecular_function
def: "Catalysis of the reaction: S-adenosyl-L-methionine + cytosine32 in tRNA= S-adenosyl-L-homocysteine + 2'-O-methylcytidine32 in tRNA." [PMID:25404562]
synonym: "tRNA (cytidine 32-2'-O)-methyltransferase activity" EXACT []
xref: EC:2.1.1.205 {source="skos:relatedMatch"}
xref: MetaCyc:RXN-11866
xref: RHEA:42396 {source="skos:relatedMatch"}
xref: EC:2.1.1.205 {source="skos:broadMatch"}
xref: MetaCyc:RXN-11866 {source="skos:exactMatch"}
xref: RHEA:42396 {source="skos:broadMatch"}
is_a: GO:0016427 ! tRNA (cytidine) methyltransferase activity
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/24771" xsd:anyURI
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/26018" xsd:anyURI
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/26086" xsd:anyURI
created_by: hjd
creation_date: 2020-11-05T22:48:53Z

Expand All @@ -437906,9 +437907,13 @@ name: tRNA (guanosine(34)-2'-O)-methyltransferase activity
namespace: molecular_function
def: "Catalysis of the reaction: S-adenosyl-L-methionine + guanosine 34 in tRNA= S-adenosyl-L-homocysteine + 2'-O-methylguanosine 34 in tRNA." [PMID:25404562]
synonym: "tRNA (guanosine 34-2'-O)-methyltransferase activity" EXACT []
xref: EC:2.1.1.205 {source="skos:broadMatch"}
xref: MetaCyc:RXN-11868 {source="skos:exactMatch"}
xref: RHEA:42396 {source="skos:broadMatch"}
is_a: GO:0016423 ! tRNA (guanosine) methyltransferase activity
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/25257" xsd:anyURI
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/26085" xsd:anyURI
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/26086" xsd:anyURI
created_by: hjd
creation_date: 2020-11-05T22:52:49Z

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Here's a diff of how these changes impact the classified ontology:

Ontology comparison

Left

  • Ontology IRI: http://purl.obolibrary.org/obo/go.owl
  • Version IRI: http://purl.obolibrary.org/obo/go/releases/2023-09-13/go.owl
  • Loaded from: file:/__w/go-ontology/go-ontology/src/ontology/../../reasoned-master.owl/reasoned.owl

Right

  • Ontology IRI: http://purl.obolibrary.org/obo/go.owl
  • Version IRI: http://purl.obolibrary.org/obo/go/releases/2023-09-13/go.owl
  • Loaded from: file:/__w/go-ontology/go-ontology/src/ontology/../../reasoned-pr.owl/reasoned.owl

Ontology imports

Ontology annotations

tRNA (cytidine(32)-2'-O)-methyltransferase activity http://purl.obolibrary.org/obo/GO_0106339

Removed

Added

tRNA (guanosine(34)-2'-O)-methyltransferase activity http://purl.obolibrary.org/obo/GO_0106340

Added

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