Merge pull request #50 from gdrplatform/GDR-2501

[GDR-2501] Correct typo reponse -> response

DESCRIPTION

@@ -22,15 +22,15 @@ Description: Package is a part of the gDR suite. It reexports functions from oth
 License: Artistic-2.0
 Depends:
     R (>= 4.2),
-    gDRcore (>= 1.1.11),
-    gDRimport (>= 1.1.4),
-    gDRutils (>= 1.1.5)
+    gDRcore (>= 1.1.19),
+    gDRimport (>= 1.1.9),
+    gDRutils (>= 1.1.12)
 Suggests:
     BiocStyle,
     BumpyMatrix,
     futile.logger,
-    gDRstyle (>= 1.1.3),
-    gDRtestData (>= 1.1.7),
+    gDRstyle (>= 1.1.5),
+    gDRtestData (>= 1.1.10),
     kableExtra,
     knitr,
     markdown,

NEWS.md

@@ -1,3 +1,6 @@
+## gDR 1.1.6 - 2024-05-08
+* fix typo
+
 ## gDR 1.1.5 - 2024-02-26
 * improve pkgdown site
   * improved references

inst/umls/overview.puml

@@ -20,7 +20,7 @@ gDRcore --> MAE: " gDRcore::runDrugResponseProcessingPipeline"
 CLI --> gDRcore
 
 note top of gDRutils
-utility functions for munging and analyzing drug reponse data
+utility functions for munging and analyzing drug response data
 end note
 
 note top on link

inst/umls/refresh.sh

@@ -1,7 +1,10 @@
 # sudo apt-get install plantuml
 # pretty old version
 #jar_path="/usr/share/platinuml/platinuml.jar"
-# https://github.com/plantuml/plantuml/releases/download/v1.2023.13/plantuml-1.2023.13.jar
 jar_path="./plantuml-1.2023.13.jar"
-#java -Djava.awt.headless=true -jar $jar_path *.puml -tsvg -o ../images/
+if [ -f $jar_path ]; then
+   echo "File $jar_path exists."
+else
+   wget https://github.com/plantuml/plantuml/releases/download/v1.2023.13/plantuml-1.2023.13.jar
+fi
 java -Djava.awt.headless=true -jar $jar_path *.puml -tpng -o ../images/

rplatform/dependencies.yaml

@@ -1,30 +1,30 @@
 pkgs:
   gDRstyle:
-    ver: '>=1.1.3'
+    ver: '>=1.1.5'
     url: gdrplatform/gDRstyle
     ref: main
     subdir: ~
     source: GITHUB
   gDRtestData:
-    ver: '>=1.1.7'
+    ver: '>=1.1.10'
     url: gdrplatform/gDRtestData
     ref: ~
     subdir: ~
     source: GITHUB
   gDRutils:
-    ver: '>=1.1.5'
+    ver: '>=1.1.12'
     url: gdrplatform/gDRutils
     ref: main
     subdir: ~
     source: GITHUB
   gDRimport:
-    ver: '>=1.1.4'
+    ver: '>=1.1.9'
     url: gdrplatform/gDRimport
     ref: main
     subdir: ~
     source: GITHUB
   gDRcore:
-    ver: '>=1.1.11'
+    ver: '>=1.1.19'
     url: gdrplatform/gDRcore
     ref: main
     subdir: ~