full test now fixed unicycler bug

gbouras13 · Sep 5, 2023 · ca685ac · ca685ac
1 parent 44e8c6f
commit ca685ac
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Showing 2 changed files with 6 additions and 5 deletions.
diff --git a/.github/workflows/ci.yaml b/.github/workflows/ci.yaml
@@ -13,7 +13,7 @@ jobs:
 
     strategy:
       matrix:
-        os: [ubuntu-latest]
+        os: [macos-latest, ubuntu-latest]
         python-version: ["3.8", "3.9"]
 
     steps:
@@ -45,6 +45,8 @@ jobs:
         run: just check-fmt
       - name: Test and generate coverage report with pytest
         shell: bash -l {0}
+        # need to set TERM to linux for some reason,kept getting a nasty error that was breaking unicycler 
+        # https://github.com/cypress-io/cypress/issues/15679
         run: |
           export TERM=linux
           unicycler --version

diff --git a/justfile b/justfile
@@ -22,17 +22,16 @@ install:
 
 # run all tests
 test opts="":
-    poetry run pytest -vv {{opts}} tests/test_end_to_end.py
-    #poetry run pytest -vv {{opts}} tests/
+    poetry run pytest -vv {{opts}} tests/
 
 # run tests with coverage report
 coverage:
-    poetry run pytest --cov-report term --cov-report html --cov={{ PROJECT }} --cov-branch tests/test_end_to_end.py
+    poetry run pytest --cov-report term --cov-report html --cov={{ PROJECT }} --cov-branch tests/
     {{ OPEN }} htmlcov/index.html
 
 # run tests on the CI
 test-ci:
-    poetry run pytest --cov={{ PROJECT }} --cov-report=xml --cov-branch tests/test_end_to_end.py
+    poetry run pytest --cov={{ PROJECT }} --cov-report=xml --cov-branch tests/
 
 # prints out the commands to run to tag the release and push it
 tag: