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Zenodo badge (#355)
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* add zenodo badge

* add zenodo badge

* code status, and Zenodo

* ignore tornado safety
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gatoniel authored Jul 25, 2023
1 parent ee2bf56 commit 76cb821
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5 changes: 4 additions & 1 deletion README.rst
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StarDist OPP
============

|PyPI| |Status| |Python Version| |License|
|PyPI| |Zenodo| |Status| |Python Version| |License|

|Read the Docs| |Tests| |Codecov|

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.. |Black| image:: https://img.shields.io/badge/code%20style-black-000000.svg
:target: https://github.com/psf/black
:alt: Black
.. |Zenodo| image:: https://zenodo.org/badge/454865222.svg
:target: https://zenodo.org/badge/latestdoi/454865222
:alt: Zenodo


This repository contains the python package for the new StarDist post-processing step *StarDist OPP*. *StarDist OPP* allows to use `StarDist`_ segmentation on non-star-convex objects. In our `paper`_, we show that *StarDist OPP* outperforms other methods in instance segmentation tasks for three-dimensional microbial biofilms. Check it out for more information.
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2 changes: 2 additions & 0 deletions noxfile.py
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Expand Up @@ -146,6 +146,8 @@ def safety(session: Session) -> None:
"--ignore=44715",
"--ignore=44716",
"--ignore=44717",
# ignore a tornado safety issue
"--ignore=59071",
)


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2 changes: 1 addition & 1 deletion pyproject.toml
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Expand Up @@ -9,7 +9,7 @@ homepage = "https://github.com/gatoniel/merge-stardist-masks"
repository = "https://github.com/gatoniel/merge-stardist-masks"
documentation = "https://merge-stardist-masks.readthedocs.io"
classifiers = [
"Development Status :: 1 - Planning",
"Development Status :: 5 - Production/Stable",
]

[tool.poetry.urls]
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