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Pull requests: galaxyproject/tools-iuc

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Pull requests list

Updating tools/lastz from version 1.04.22 to 1.04.41
#6649 opened Dec 23, 2024 by gxydevbot Loading…
Move filtering functions from Anndata to Scanpy tool
#6648 opened Dec 20, 2024 by pavanvidem Loading…
3 of 5 tasks
Add Fairy
#6647 opened Dec 20, 2024 by SantaMcCloud Loading…
3 of 5 tasks
26
Add deeparg
#6646 opened Dec 19, 2024 by hugolefeuvre Loading…
3 of 5 tasks
3
wrappers for ppanggolin all and ppanggolin msa
#6645 opened Dec 18, 2024 by thomas-lacroix Loading…
3 of 5 tasks
23
Update anndata - galaxy version 1
#6644 opened Dec 17, 2024 by nilchia • Draft
3 of 5 tasks
5
[EMBOSS] Add Needleall tool (v6) and bump version for needle to v6
#6643 opened Dec 16, 2024 by shiltemann Loading…
3 of 5 tasks
19
Fastp fixes
#6642 opened Dec 16, 2024 by bernt-matthias Loading…
3 of 5 tasks
1
Updating tools/umi_tools from version 1.1.5 to 1.1.6
#6639 opened Dec 16, 2024 by gxydevbot Loading…
Updating tools/tximport from version 1.30.0 to 1.34.0
#6638 opened Dec 16, 2024 by gxydevbot Loading…
Updating tools/pbmm2 from version 1.16.0 to 1.16.99
#6637 opened Dec 16, 2024 by gxydevbot Loading…
Updating tools/decontam from version 1.22.0 to 1.26.0
#6634 opened Dec 16, 2024 by gxydevbot Loading…
Updating tools/cutadapt from version 4.9 to 5.0
#6633 opened Dec 16, 2024 by gxydevbot Loading…
Updating tools/ancombc from version 1.4.0 to 2.8.0
#6632 opened Dec 16, 2024 by gxydevbot Loading…
add: implement tool to add rank names to phyloseq object
#6625 opened Dec 12, 2024 by MaraBesemer Loading…
3 of 5 tasks
11
volcanoplot bump
#6622 opened Dec 11, 2024 by bgruening Loading…
5 tasks
1
8
Sourmash wrapper
#6618 opened Dec 11, 2024 by renu-pal • Draft
4
Updating tools/microsatbed from version 1.3.3 to 1.4.1
#6616 opened Dec 9, 2024 by gxydevbot Loading…
Staramr add DM and update tool with database information
#6609 opened Dec 4, 2024 by hugolefeuvre Loading…
3 of 5 tasks
Updating tools/repeatmodeler from version 2.0.5 to 2.0.6
#6604 opened Dec 2, 2024 by gxydevbot Loading…
Updating tools/hifiasm from version 0.20.0 to 0.24.0
#6602 opened Dec 2, 2024 by gxydevbot Loading…
3
Updating tools/bigwig_outlier_bed from version 0.2.2 to 0.2.3
#6599 opened Dec 2, 2024 by gxydevbot Loading…
2
correctly embed reference in bam/cram
#6594 opened Nov 28, 2024 by alpapan Loading…
3 of 5 tasks
4
update dada2 reference data
#6593 opened Nov 27, 2024 by bernt-matthias • Draft
3 of 5 tasks
1
snippy: support --ctgs parameter
#6591 opened Nov 27, 2024 by jianzuoyi Loading…
3 of 5 tasks
3
ProTip! What’s not been updated in a month: updated:<2024-11-26.