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Set ODS from ids objects #282

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wants to merge 69 commits into from
Closed

Set ODS from ids objects #282

wants to merge 69 commits into from

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AreWeDreaming
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Leaf of #258.
Allows an ODS to be set using an IDS (not database) object.
Example syntax

ods = load_omas_imas(paths=omas_paths,
                                     imas_version=os.environ["IMAS_VERSION"], 
                                     ext_ids=ids)

with omas_paths a list of IMAS paths in the form of equilibrium.time_slice.0.profiles_2d.0.psi and ids in this case an instance of imas.equilibrium() with data.
Limitations:

  • Does not allow automatic discovery, i.e. only works if paths is set
  • Does not allow broadcasting, e.g. equilibrium.time_slice.:.profiles_2d

@AreWeDreaming
Extended magnetic mapping
f0e5394 
- This my crude attempt to allow mapping between
rho_pol_norm <-> rho_tor_norm
- This also includes phi
- I qualitatively tested rho_pol_norm -> rho_tor_norm
- Might have some COCOS issues
- Probably overly complicated
- Needs dynamic fetching of `phi` and `rho_pol_norm`
@AreWeDreaming
Fixed some horrible math errors from last commit
2f0e0b3 
- Tested against mapping form OMFITprofiles
- Results are OK by eye. Numerical verification still pending.
@AreWeDreaming
Fixed error in rho_tor to rho_pol conversion
a634444
@AreWeDreaming
Merged master into this branch
1d7ab5e
@AreWeDreaming
Fixed some bugs, but the result is still wrong
a35e79d
@AreWeDreaming
Fixed broken psi <-> conversion
df2cf6b 
- Results seem good now
@AreWeDreaming
Merge remote-tracking branch 'origin/master' into mapping_to_from_rho…
989b295 
…_tor_norm
@AreWeDreaming
Some changes that allow imas_set for ids objects
fbdd940
@AreWeDreaming
Merge branch 'EFIT_mdsplus_mapping' into test_new_EFIT_mappings_for_IDA
37fb8f0
@AreWeDreaming
Merge remote-tracking branch 'origin/EFIT_mdsplus_mapping' into test_…
ed3700f 
…new_EFIT_mappings_for_IDA
@AreWeDreaming
Merge remote-tracking branch 'origin/imas_set_for_ids_objects' into t…
bae815f 
…est_new_EFIT_mappings_for_IDA
@AreWeDreaming
Merge remote-tracking branch 'origin/EFIT_mdsplus_mapping' into test_…
d0a7197 
…new_EFIT_mappings_for_IDA
@AreWeDreaming
Merge remote-tracking branch 'origin/EFIT_mdsplus_mapping' into test_…
432a26b 
…new_EFIT_mappings_for_IDA
@AreWeDreaming
Merge remote-tracking branch 'origin/EFIT_mdsplus_mapping' into test_…
97d4aba 
…new_EFIT_mappings_for_IDA
@AreWeDreaming
Merge remote-tracking branch 'origin/EFIT_mdsplus_mapping' into test_…
537f900 
…new_EFIT_mappings_for_IDA
@AreWeDreaming
Merge remote-tracking branch 'origin/EFIT_mdsplus_mapping' into test_…
a71f710 
…new_EFIT_mappings_for_IDA
@AreWeDreaming
Merge remote-tracking branch 'origin/EFIT_mdsplus_mapping' into test_…
8bf84e6 
…new_EFIT_mappings_for_IDA
@AreWeDreaming
Merge remote-tracking branch 'origin/EFIT_mdsplus_mapping' into test_…
b1df43a 
…new_EFIT_mappings_for_IDA
@AreWeDreaming
Merge remote-tracking branch 'origin/EFIT_mdsplus_mapping' into test_…
a8c90d9 
…new_EFIT_mappings_for_IDA
@AreWeDreaming
Merge remote-tracking branch 'origin/EFIT_mdsplus_mapping' into test_…
699ec70 
…new_EFIT_mappings_for_IDA
@AreWeDreaming
Merge remote-tracking branch 'origin/EFIT_mdsplus_mapping' into test_…
1382e78 
…new_EFIT_mappings_for_IDA
@AreWeDreaming
Merge remote-tracking branch 'origin/EFIT_mdsplus_mapping' into test_…
48371b6 
…new_EFIT_mappings_for_IDA
@AreWeDreaming
Merge remote-tracking branch 'origin/EFIT_mdsplus_mapping' into test_…
8d958d7 
…new_EFIT_mappings_for_IDA
@AreWeDreaming
Cherry picked changes from omas_viewer_dev
d7ad23e
@AreWeDreaming
Fixed missing raised exception
8bb1966
@AreWeDreaming
Merge branch 'EFIT_mdsplus_mapping' into cherry_pick_omas_viewer_dev
9a93cb5
@AreWeDreaming
How to fix closest_wall_point.distance
ed4dc2b
@AreWeDreaming
Fixed extra argument in min)4
97df88f
@AreWeDreaming
Merge remote-tracking branch 'origin/cherry_pick_omas_viewer_dev' int…
be1243f 
…o test_new_EFIT_mappings_for_IDA
@AreWeDreaming
Fixed missing raised exception
6b0bf16
@AreWeDreaming
Exception handling to look at older EFIT MDS+
1ce3cf3
@AreWeDreaming
Merge branch 'EFIT_mdsplus_mapping' into test_new_EFIT_mappings_for_IDA
0d9a398
@AreWeDreaming
Merge branch 'test_new_EFIT_mappings_for_IDA' of github.com:gafusion/…
2470512 
…omas into test_new_EFIT_mappings_for_IDA
@AreWeDreaming
Merge indentation fixes
d363957
@AreWeDreaming
Merge branch 'test_new_EFIT_mappings_for_IDA' of github.com:gafusion/…
e12d609 
…omas into test_new_EFIT_mappings_for_IDA
@AreWeDreaming
Merge branch 'EFIT_mdsplus_mapping' into test_new_EFIT_mappings_for_IDA
dc92fa9
@AreWeDreaming
Merge branch 'EFIT_mdsplus_mapping' into cherry_pick_omas_viewer_dev
a7fcf51
@AreWeDreaming
Fixes for the failing omas_plot regression test
4a3b09e
@AreWeDreaming
More robustly handle multiple run ids
db70f71
@AreWeDreaming
Added density_thermal, begrudgingly
96a5170
@AreWeDreaming
Handling mismatched times from profiles and eq
5576428
@AreWeDreaming
Merge remote-tracking branch 'origin/EFIT_mdsplus_mapping' into omas_…
a0cf687 
…plot_w_new_EFIT_mapping
@AreWeDreaming
use_subplot support without manager
0b3ed22
@AreWeDreaming
Merge branch 'master' into test_new_EFIT_mappings_for_IDA
a613a21
@AreWeDreaming
Merge branch 'test_new_EFIT_mappings_for_IDA' into omas_plot_w_new_EF…
2b0ff47 
…IT_mapping
@AreWeDreaming
Fixed error in carbon density and redundant loads
3c19d7b
@AreWeDreaming
Merge remote-tracking branch 'origin/master' into cherry_pick_omas_vi…
cd09d0d 
…ewer_dev
@AreWeDreaming
Attempt to fix regression
51dba47
@AreWeDreaming
Merge remote-tracking branch 'origin/master' into omas_plot_w_new_EFI…
8c0f4d7 
…T_mapping
@AreWeDreaming
Merge branch 'master' into cherry_pick_omas_viewer_dev
e0351d1
@AreWeDreaming
electrons.density_~~thermal~~
bef0a6e
@AreWeDreaming
Fixed density_thermal in sample data
b627204
@AreWeDreaming
Robustness upgrades to pass omas_test_plot
77bad43
@AreWeDreaming
Replace deprecated interp2d->RectBivariateSpline
ddaf49d 
- Plus 2 missed density_thermal
@AreWeDreaming
Merge branch 'cherry_pick_omas_viewer_dev' into omas_plot_w_new_EFIT_…
df0ae53 
…mapping
@AreWeDreaming AreWeDreaming changed the title Imas set for ids objects Set ODS from ids objects Dec 12, 2023
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