ci: migrate ubuntu-latest to ubuntu-24.04 (#29)

* ci: migrate ubuntu-latest to ubuntu-24.04 * feat: update to 3.9 * ci: update mypy to 1.13
fulcrumgenomics · Dec 4, 2024 · c69b108 · c69b108
1 parent c1b67d9
commit c69b108
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diff --git a/.github/CODEOWNERS b/.github/CODEOWNERS
@@ -0,0 +1 @@
+* @nh13
diff --git a/.github/workflows/pythonpackage.yml b/.github/workflows/pythonpackage.yml
@@ -2,15 +2,15 @@ name: Python package
 
 on: [push]
 env:
-  POETRY_VERSION: 1.0
+  POETRY_VERSION: 1.8.3
 
 jobs:
   testing:
-    runs-on: ubuntu-latest
+    runs-on: ubuntu-24.04
     environment: github-actions-ci
     strategy:
       matrix:
-        PYTHON_VERSION: [3.8]
+        PYTHON_VERSION: [3.9]
     steps:
     - uses: actions/checkout@v2
 

diff --git a/README.md b/README.md
@@ -37,7 +37,7 @@
 
 `pip install pyfgaws`
 
-**Requires python 3.8**
+**Requires python 3.9**
 
 # Getting Setup
 

diff --git a/conda-requirements.txt b/conda-requirements.txt
@@ -1,3 +1,3 @@
 # Setup python version and poetry
-python=3.8.2
-poetry=1.0.5
+python=3.9
+poetry=1.8.3
diff --git a/poetry.lock b/poetry.lock
diff --git a/pyfgaws/batch/api.py b/pyfgaws/batch/api.py
@@ -28,7 +28,7 @@
 from mypy_boto3_batch.type_defs import KeyValuePairTypeDef  # noqa
 from mypy_boto3_batch.type_defs import NodeOverridesTypeDef  # noqa
 from mypy_boto3_batch.type_defs import ResourceRequirementTypeDef  # noqa
-from mypy_boto3_batch.type_defs import RetryStrategyTypeDef  # noqa
+from mypy_boto3_batch.type_defs import RetryStrategyOutputTypeDef  # noqa
 from mypy_boto3_batch.type_defs import SubmitJobResponseTypeDef  # noqa
 
 from pyfgaws.core import MINIMUM_DELAY
@@ -149,7 +149,7 @@ def __init__(
         parameters: Optional[Dict[str, str]] = None,
         container_overrides: Optional[ContainerOverridesTypeDef] = None,
         node_overrides: Optional[NodeOverridesTypeDef] = None,
-        retry_strategy: Optional[RetryStrategyTypeDef] = None,
+        retry_strategy: Optional[RetryStrategyOutputTypeDef] = None,
         timeout: Optional[JobTimeoutTypeDef] = None,
         logger: Optional[logging.Logger] = None,
     ) -> None:
@@ -181,7 +181,7 @@ def __init__(
             container_overrides
         )
         self.node_overrides: Optional[NodeOverridesTypeDef] = node_overrides
-        self.retry_strategy: Optional[RetryStrategyTypeDef] = retry_strategy
+        self.retry_strategy: Optional[RetryStrategyOutputTypeDef] = retry_strategy
         self.timeout: Optional[JobTimeoutTypeDef] = timeout
 
         # Add to container overrides

diff --git a/pyproject.toml b/pyproject.toml
@@ -26,7 +26,7 @@ include = [
 
 
 [tool.poetry.dependencies]
-python = "^3.8"
+python = "^3.9"
 attrs = "^19.3.0"
 defopt = "^6.0"
 boto3 = "^1.13.18"
@@ -37,7 +37,7 @@ fgpyo = "^0.0.6"
 
 [tool.poetry.dev-dependencies]
 pytest = "^5.4.2"
-mypy = "^0.770"
+mypy = ">=1.7.0"
 flake8 = "^3.8.1"
 black = "^23.1.0"
 pytest-cov = ">=2.8.1"