Remove some commented out code.

fulcrumgenomics · Jan 15, 2025 · b9c96f1 · b9c96f1
1 parent 712af77
commit b9c96f1
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Showing 2 changed files with 2 additions and 37 deletions.
diff --git a/prymer/primer3/primer3_parameters.py b/prymer/primer3/primer3_parameters.py
@@ -121,6 +121,8 @@ class PrimerAndAmpliconParameters:
     primer_max_3p_homodimer_tm: Optional[float] = None
     primer_max_hairpin_tm: Optional[float] = None
 
+
+
     def __post_init__(self) -> None:
         if self.primer_max_dinuc_bases % 2 == 1:
             raise ValueError("Primer Max Dinuc Bases must be an even number of bases")

diff --git a/prymer/thermo.py b/prymer/thermo.py
@@ -84,43 +84,6 @@ def __post_init__(self) -> None:
             salt_corrections_method=self.salt_corrections_method,
         )
 
-    # @staticmethod
-    # def from_primer_params(p: PrimerAndAmpliconParameters) -> "Thermo":
-    #     return Thermo(
-    #         mv_conc_mm=p.,
-    #         dv_conc_mm=p.,
-    #         dntp_conc_mm=p.,
-    #         dna_conc_nm=p.,
-    #         dmso_conc_pct=p.,
-    #         dmso_correction_factor=p.,
-    #         formamide_conc_mol=p.,
-    #         annealing_temp_c=p.,
-    #         temp_c=p.,
-    #         max_nn_length=p.,
-    #         max_loop=p.,
-    #         tm_method=p.,
-    #         salt_corrections_method=p.,
-    #     )
-    #
-    # @staticmethod
-    # def from_probe_params(p: ProbeParameters) -> "Thermo":
-    #     return Thermo(
-    #         mv_conc_mm=p.,
-    #         dv_conc_mm=p.,
-    #         dntp_conc_mm=p.,
-    #         dna_conc_nm=p.,
-    #         dmso_conc_pct=p.,
-    #         dmso_correction_factor=p.,
-    #         formamide_conc_mol=p.,
-    #         annealing_temp_c=p.,
-    #         temp_c=p.,
-    #         max_nn_length=p.,
-    #         max_loop=p.,
-    #         tm_method=p.,
-    #         salt_corrections_method=p.,
-    #     )
-
-
     def tm(self, bases: str) -> float:
         """
         Calculates the melting temperature of a sequence of bases.  The calculation used differs