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docs: upgrade the docs to rely on bwa-aln-interactive in bioconda
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clintval committed Sep 20, 2024
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4 changes: 1 addition & 3 deletions docs/installation-and-developers-documentation.md
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Expand Up @@ -10,7 +10,7 @@ To satisfy these requirements, it is recommended to install using [bioconda](htt
mamba install -c bioconda prymer
```

## Installation for Development
## Installation for Development and Release

1. Install the environment manager [`mamba`](https://mamba.readthedocs.io/en/latest/installation/mamba-installation.html)
2. Install the Python build tool [`poetry`](https://python-poetry.org/docs/#installing-with-the-official-installer)
Expand All @@ -33,8 +33,6 @@ mamba install -c bioconda prymer

# Checking the Build

Make sure that [instructions for development work](#getting-setup-for-development-work) have been followed.

Use `poetry` to format, lint, type-check, and test your code.

Note that `poetry run pytest` will run `mypy` and `ruff` checks, `pytest` unit tests, and will provide a unit test coverage report.
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