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  1. novonordisk-research/BEE-BO novonordisk-research/BEE-BO Public

    Batched Energy-Entropy acquisition for Bayesian Optimization (NeurIPS 2024)

    Python 3 1

  2. signalp-6.0 signalp-6.0 Public

    Multi-class signal peptide prediction and structure decoding model.

    Python 83 15

  3. graph-part/graph-part graph-part/graph-part Public

    GraphPart, a data partitioning method for ML on biological sequences

    Jupyter Notebook 21 5

  4. frederikkemarin/BEND frederikkemarin/BEND Public

    Benchmarking DNA Language Models on Biologically Meaningful Tasks

    Python 96 13

  5. alphafold-peptide-receptors alphafold-peptide-receptors Public

    Identifying peptide-receptor interactions using AlphaFold-Multimer

    Jupyter Notebook 24 6

  6. SecretoGen SecretoGen Public

    A conditional generative model for signal peptide design and efficiency prediction

    Python 4 2