v2.6

What's Changed

• Expose more options in workflow; clean up core Python scripts by @etal in #10
• Update in-repo documentation by @etal in #13
• test: Ensure build/ output directory exists before writing to it by @etal in #15
• Refactor report template vs. scripts by @etal in #14
• Report updates and bugfix by @etal in #27
• Add FASTQ input and position-sorted, indexed BAM output by @etal in #28
• Use a second sentinel file in case 2 input files are missing by @etal in #33

Full Changelog: v2.5...v2.6