Activate conda env after setting shell in workflows main.yml

foerstner-lab · Sep 8, 2023 · eb7a3fa · eb7a3fa
1 parent 55c3da8
commit eb7a3fa
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml
@@ -41,7 +41,6 @@ jobs:
       with:
           activate-conda: false
     - run: conda create -n myenv python=3.9
-    - run: conda activate myenv
     - run: conda --version
     - run: which python
 
@@ -52,6 +51,7 @@ jobs:
     - name: Add reademption bin to PATH
       shell: bash
       run: echo "bin" >> $GITHUB_PATH
+    - run: conda activate myenv
     - name: Install dependencies
       run: |
         python -m pip install --upgrade pip