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week3
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bbrejova committed Oct 9, 2024
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4 changes: 2 additions & 2 deletions Materials.md
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Expand Up @@ -60,7 +60,7 @@ L: lecture (everybody), TI: tutorial for computer science/informatics students,
#### L: Genome assembly 2

{% include pdf.html file="p-seq2" name="pdf" show=1 dot=1
%} {% include youtube.html id="YvZlTL1qyUg" name="video 1" show=1 dot=0
%} {% include youtube.html id="YvZlTL1qyUg" name="video" show=1 dot=0
%}

#### TI: Introduction to probability, genome coverage by sequencing reads,
Expand All @@ -83,7 +83,7 @@ L: lecture (everybody), TI: tutorial for computer science/informatics students,
#### L: Sequence alignment: Smith-Waterman, Needleman-Wunsch, scoring

{% include pdf.html file="p-aln1" name="pdf" show=1 dot=1
%} {% include youtube.html id="0GkhkRiqbl4" name="video 1" show=1 dot=0
%} {% include youtube.html id="0GkhkRiqbl4" name="video" show=1 dot=0
%} BV chapter 2, DEKM chapter 2.1-2.4, 2.8, ZB chapter 4.1-4.4, 5.1-5.2

#### TI: Introduction to dynamic programming, proteomics
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6 changes: 3 additions & 3 deletions notes/ci-msms.md
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Expand Up @@ -9,10 +9,10 @@ title: "Cvičenia pre informatikov: Úvod do dynamického programovania, proteom

## Uvod do proteomiky

- Viac informacii: [1](http://www.cs.uwaterloo.ca/~binma/cs882/),
<!-- - Viac informacii: [1](http://www.cs.uwaterloo.ca/~binma/cs882/),
[Bafna,
Reinert 2004](http://citeseerx.ist.psu.edu/viewdoc/download?doi=10.1.1.85.933&rep=rep1&type=pdf)
- Pozri tiež prezentáciu k cvičeniu
Reinert 2004](http://citeseerx.ist.psu.edu/viewdoc/download?doi=10.1.1.85.933&rep=rep1&type=pdf) -->


Gélová elektroforéza (gel electrophoresis) - uvedene pre zaujimavost,
nerobili sme
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