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Update movies.py
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Update README.md

Fixed "get_file_size" functions inability to handle '.npy' files.

Update README.md
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darikoneil committed Dec 12, 2024
1 parent bb55800 commit 1430026
Showing 1 changed file with 4 additions and 0 deletions.
4 changes: 4 additions & 0 deletions caiman/base/movies.py
Original file line number Diff line number Diff line change
Expand Up @@ -2025,6 +2025,10 @@ def get_file_size(file_name, var_name_hdf5:str='mov') -> tuple[tuple, Union[int,
logger.error(f'The file does not contain a variable named {var_name_hdf5}')
raise Exception('Variable not found. Use one of the above')
T, dims = siz[0], siz[1:]
elif extension in ('.npy', ):
shape = np.load(file_name, allow_pickle=False).shape
T = shape[0]
dims = shape[1:]
elif extension in ('.sbx'):
shape = caiman.utils.sbx_utils.sbx_shape(file_name[:-4])
T = shape[-1]
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