Remove skcuda from motion_correction. Implements #1416 #212
Workflow file for this run
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name: Linux Conda test | |
on: | |
pull_request: | |
branches: | |
- main | |
- dev | |
push: | |
branches: | |
- main | |
jobs: | |
build-linux-conda: | |
runs-on: ubuntu-latest | |
strategy: | |
max-parallel: 5 | |
matrix: | |
python-version: ['3.9', '3.10', '3.11'] | |
fail-fast: false | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Conda | |
uses: conda-incubator/setup-miniconda@v3 | |
with: | |
auto-update-conda: true | |
python-version: ${{ matrix.python-version }} | |
environment-file: environment-minimal.yml | |
activate-environment: caiman | |
conda-solver: libmamba | |
- name: Install OS Dependencies | |
shell: bash -l {0} | |
run: | | |
sudo apt-get install libglapi-mesa libegl-mesa0 libegl1 libopengl0 libgl1-mesa-glx | |
- name: Install Dependencies | |
shell: bash -l {0} | |
run: | | |
conda install pip | |
pip install -e . | |
caimanmanager install --inplace | |
- name: Test | |
shell: bash -l {0} | |
run: | | |
caimanmanager test |