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# Auto detect text files and perform LF normalization | ||
* text=auto | ||
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# Custom for Visual Studio | ||
*.cs diff=csharp | ||
*.sln merge=union | ||
*.csproj merge=union | ||
*.vbproj merge=union | ||
*.fsproj merge=union | ||
*.dbproj merge=union | ||
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# Standard to msysgit | ||
*.doc diff=astextplain | ||
*.DOC diff=astextplain | ||
*.docx diff=astextplain | ||
*.DOCX diff=astextplain | ||
*.dot diff=astextplain | ||
*.DOT diff=astextplain | ||
*.pdf diff=astextplain | ||
*.PDF diff=astextplain | ||
*.rtf diff=astextplain | ||
*.RTF diff=astextplain |
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################# | ||
## Eclipse | ||
################# | ||
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*.pydevproject | ||
.project | ||
.metadata | ||
bin/ | ||
tmp/ | ||
*.tmp | ||
*.bak | ||
*.swp | ||
*~.nib | ||
local.properties | ||
.classpath | ||
.settings/ | ||
.loadpath | ||
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# External tool builders | ||
.externalToolBuilders/ | ||
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# Locally stored "Eclipse launch configurations" | ||
*.launch | ||
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# CDT-specific | ||
.cproject | ||
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# PDT-specific | ||
.buildpath | ||
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################# | ||
## Visual Studio | ||
################# | ||
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## Ignore Visual Studio temporary files, build results, and | ||
## files generated by popular Visual Studio add-ons. | ||
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# User-specific files | ||
*.suo | ||
*.user | ||
*.sln.docstates | ||
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# Build results | ||
[Dd]ebug/ | ||
[Rr]elease/ | ||
*_i.c | ||
*_p.c | ||
*.ilk | ||
*.meta | ||
*.obj | ||
*.pch | ||
*.pdb | ||
*.pgc | ||
*.pgd | ||
*.rsp | ||
*.sbr | ||
*.tlb | ||
*.tli | ||
*.tlh | ||
*.tmp | ||
*.vspscc | ||
.builds | ||
*.dotCover | ||
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## TODO: If you have NuGet Package Restore enabled, uncomment this | ||
#packages/ | ||
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# Visual C++ cache files | ||
ipch/ | ||
*.aps | ||
*.ncb | ||
*.opensdf | ||
*.sdf | ||
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# Visual Studio profiler | ||
*.psess | ||
*.vsp | ||
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# ReSharper is a .NET coding add-in | ||
_ReSharper* | ||
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# Installshield output folder | ||
[Ee]xpress | ||
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# DocProject is a documentation generator add-in | ||
DocProject/buildhelp/ | ||
DocProject/Help/*.HxT | ||
DocProject/Help/*.HxC | ||
DocProject/Help/*.hhc | ||
DocProject/Help/*.hhk | ||
DocProject/Help/*.hhp | ||
DocProject/Help/Html2 | ||
DocProject/Help/html | ||
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# Click-Once directory | ||
publish | ||
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# Others | ||
[Bb]in | ||
[Oo]bj | ||
sql | ||
TestResults | ||
*.Cache | ||
ClientBin | ||
stylecop.* | ||
~$* | ||
*.dbmdl | ||
Generated_Code #added for RIA/Silverlight projects | ||
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# Backup & report files from converting an old project file to a newer | ||
# Visual Studio version. Backup files are not needed, because we have git ;-) | ||
_UpgradeReport_Files/ | ||
Backup*/ | ||
UpgradeLog*.XML | ||
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############ | ||
## Windows | ||
############ | ||
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# Windows image file caches | ||
Thumbs.db | ||
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# Folder config file | ||
Desktop.ini | ||
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############# | ||
## Python | ||
############# | ||
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*.py[co] | ||
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# Packages | ||
*.egg | ||
*.egg-info | ||
dist | ||
build | ||
eggs | ||
parts | ||
bin | ||
var | ||
sdist | ||
develop-eggs | ||
.installed.cfg | ||
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# Installer logs | ||
pip-log.txt | ||
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# Unit test / coverage reports | ||
.coverage | ||
.tox | ||
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#Translations | ||
*.mo | ||
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#Mr Developer | ||
.mr.developer.cfg | ||
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# Mac crap | ||
.DS_Store |
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# LibSEDML | ||
Some time ago I developed [libSedML](http://libsedml.sf.net) a C# library that fully supports [SED-ML](http://sed-ml.org) for SBML as well as CellML models for creation of the description just as for the execution of Simulation Experiments. However, frequently the question to a C++ based library comes up. This project makes use of [libSBML](http://sbml.org/Software/libSBML) XML layer as well as code generation as starting point to produce a library for reading and writing of SED-ML models. | ||
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## Dependencies | ||
This library requires libSBML to be present, as its XML parsing layer will be used. for that either expat, xerces-c or libXML2 needs to be available. | ||
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## Building | ||
This library uses [CMake](http://cmake.org) to build the library, so from an initial checkout all you would need todo is to run: | ||
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mkdir build | ||
cd build | ||
cmake -DLIBSBML_LIBRARY=< path to libsbml lib> -DLIBSBML_INCLUDE_DIR=< path to includes > ... | ||
make | ||
make install | ||
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Should libSBML be installed in a default location it will be found automatically. | ||
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## License | ||
Copyright (c) 2013, Frank T. Bergmann | ||
All rights reserved. | ||
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Redistribution and use in source and binary forms, with or without | ||
modification, are permitted provided that the following conditions are met: | ||
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1. Redistributions of source code must retain the above copyright notice, this | ||
list of conditions and the following disclaimer. | ||
2. Redistributions in binary form must reproduce the above copyright notice, | ||
this list of conditions and the following disclaimer in the documentation | ||
and/or other materials provided with the distribution. | ||
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THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND | ||
ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED | ||
WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE | ||
DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR | ||
ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES | ||
(INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; | ||
LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND | ||
ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT | ||
(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS | ||
SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. |