The Zhang Lab
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- pyCellPhenoX Public
An eXplainable Cell-specific machine learning method to predict clinical Phenotypes using single-cell multi-omics
fanzhanglab/pyCellPhenoX’s past year of commit activity - singlecell_functions Public
We implemented and generalized single-cell functions and targeted analytical code for single-cell omics data analysis.
fanzhanglab/singlecell_functions’s past year of commit activity - Zhang_lab_manual Public
The Zhang Lab Manual: Lab principles and activities, handbook for reproducible computational research, learning resources, expectations and achievements, etc
fanzhanglab/Zhang_lab_manual’s past year of commit activity - SCRNA-GWAS-Benchmarking Public
This repository contains the work/pipeline done to prepare GWAS summary statistics, run MAGMA, scGWAS, and scDRS for ...
fanzhanglab/SCRNA-GWAS-Benchmarking’s past year of commit activity - wall-of-software Public Forked from CU-DBMI/wall-of-software
A list of tools, packages, workflows, resources, and other software developed at or in collaboration with DBMI
fanzhanglab/wall-of-software’s past year of commit activity - singlecell_preprocessing Public
Single-cell preprocessing pipelines, such as converting raw bcl files, make fastqs and then generating quantified matrix, etc
fanzhanglab/singlecell_preprocessing’s past year of commit activity - rvd2_variational_bayesian Public
Code for our novel Variational Bayesian method for Zhang, Flaherty, BMC Bioinformatics, 2017. This is a Python-based tool for sensitive rare variant detection for NGS data.
fanzhanglab/rvd2_variational_bayesian’s past year of commit activity
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