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Fix summary reading being too slow in case of many summary keys to match against #4744

Fix summary reading being too slow in case of many summary keys to match against

Fix summary reading being too slow in case of many summary keys to match against #4744

Workflow file for this run

name: Build and test ERT and docs
on:
push:
branches:
- main
- 'version-**'
tags: "*"
pull_request:
env:
ERT_SHOW_BACKTRACE: 1
ECL_SKIP_SIGNAL: 1
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: ${{ github.ref != 'refs/heads/main' }}
jobs:
build-test-cmake:
name: Run C++ tests and coverage
timeout-minutes: 10
strategy:
fail-fast: false
matrix:
os: ['ubuntu-latest', 'macos-latest-xlarge']
runs-on: ${{ matrix.os }}
steps:
- uses: actions/checkout@v4
- name: Install Ubuntu dependencies
if: matrix.os == 'ubuntu-latest'
run: |
sudo apt-get update -y
sudo apt-get install -y valgrind
- uses: actions/setup-python@v5
id: setup_python
with:
python-version: '3.12'
- uses: actions/cache@v4
with:
path: ~/.conan/
key: ${{ matrix.os }}-conan-${{ hashFiles('**/CMakeLists.txt') }}
- name: Install dependencies from PyPI
run: |
python3 -m pip install "conan<2" pybind11 resdata
echo "PIP_PKGS_PATH=$(python3 -m pip show conan | grep Location | cut -d ' ' -f 2 | sed -e 's@/lib/.*site-packages$@/bin@')" >> "$GITHUB_ENV"
- name: Build ert clib
run: |
export PATH=$PATH:${{ env.PIP_PKGS_PATH }}
mkdir cmake-build
cmake -S src/clib -B cmake-build -DCMAKE_BUILD_TYPE=Debug -DBUILD_TESTS=ON -DCOVERAGE=ON
cmake --build cmake-build "-j$(nproc)"
- name: Run tests
run: |
cd cmake-build
export PATH=$PWD/bin:$PATH
ctest --output-on-failure
- name: Install gcovr
if: matrix.os == 'ubuntu-latest'
run: |
python3 -m pip install gcovr
- name: generate coverage report
if: matrix.os == 'ubuntu-latest'
run: |
export PATH=$PATH:${{ env.PIP_PKGS_PATH }}
gcovr -r src/clib/ --gcov-ignore-parse-errors=negative_hits.warn --exclude-directories ".*tests" cmake-build/ --xml -o cov.xml
- name: Upload c coverage to Codecov
uses: codecov/codecov-action@v4
id: codecov1
if: matrix.os == 'ubuntu-latest'
continue-on-error: true
with:
token: ${{ secrets.CODECOV_TOKEN }}
fail_ci_if_error: true
files: cov.xml
- name: codecov retry sleep
if: matrix.os == 'ubuntu-latest' && steps.codecov1.outcome == 'failure'
run: |
sleep 30
- name: Codecov retry
uses: codecov/codecov-action@v4
if: matrix.os == 'ubuntu-latest' && steps.codecov1.outcome == 'failure'
with:
token: ${{ secrets.CODECOV_TOKEN }}
fail_ci_if_error: true
files: cov.xml
build-linux:
strategy:
fail-fast: false
matrix:
python-version: [ '3.8', '3.9', '3.10', '3.11', '3.12' ]
uses: ./.github/workflows/build-wheels-linux.yml
with:
python-version: ${{ matrix.python-version }}
build-mac:
strategy:
fail-fast: false
matrix:
python-version: [ '3.8', '3.9', '3.10', '3.11', '3.12' ]
os: [ 'macos-13', 'macos-latest-xlarge' ]
exclude:
- os: 'macos-latest-xlarge'
python-version: '3.8'
- os: 'macos-latest-xlarge'
python-version: '3.9'
uses: ./.github/workflows/build-wheels-macos.yml
with:
python-version: ${{ matrix.python-version }}
os: ${{ matrix.os }}
test-linux:
needs: [build-linux]
strategy:
fail-fast: false
matrix:
test-type: [ 'integration-tests', 'unit-tests', 'gui-test' ]
python-version: [ '3.8', '3.11', '3.12' ]
os: [ ubuntu-latest ]
uses: ./.github/workflows/test_ert.yml
with:
os: ${{ matrix.os }}
python-version: ${{ matrix.python-version }}
test-type: ${{ matrix.test-type }}
test-slurm:
needs: [build-linux]
strategy:
fail-fast: false
matrix:
os: [ ubuntu-latest ]
python-version: [ '3.8', '3.11', '3.12' ]
uses: ./.github/workflows/test_ert_with_slurm.yml
with:
os: ${{ matrix.os }}
python-version: ${{ matrix.python-version }}
test-mac:
needs: [build-mac]
strategy:
fail-fast: false
matrix:
test-type: [ 'integration-tests', 'unit-tests', 'gui-test' ]
python-version: [ '3.8', '3.12' ]
os: [ 'macos-13', 'macos-latest-xlarge' ]
exclude:
- os: 'macos-latest-xlarge'
python-version: '3.8'
uses: ./.github/workflows/test_ert.yml
with:
os: ${{ matrix.os }}
python-version: ${{ matrix.python-version }}
test-type: ${{ matrix.test-type }}
docs-ert:
name: Test ert docs
needs: [build-linux]
strategy:
fail-fast: false
matrix:
python-version: ['3.12']
os: [ubuntu-latest]
runs-on: ${{ matrix.os }}
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 0
- uses: './.github/actions/install_dependencies'
with:
os: ${{ matrix.os }}
- name: Install pandoc
run: |
sudo apt install pandoc
- uses: actions/setup-python@v5
id: setup_python
with:
python-version: ${{ matrix.python-version }}
cache: "pip"
cache-dependency-path: |
pyproject.toml
- name: Get wheels
uses: actions/download-artifact@v4
with:
name: ${{ matrix.os }} Python ${{ matrix.python-version }} wheel
- name: Install wheel
run: |
find . -name "*.whl" -exec pip install "{}[dev]" \;
- name: Make test directory
run: |
mkdir tmp_tests
mv tests tmp_tests/tests
mv test-data tmp_tests/test-data
mkdir tmp_tests/.git
- name: Test docs
run: |
sphinx-build -n -v -E -W ./docs ./tmp/ert_docs
publish:
name: Publish to PyPI
runs-on: ubuntu-latest
needs: [build-test-cmake, test-linux, test-mac, docs-ert]
permissions:
id-token: write
# If this is a tagged release
if: github.event_name == 'push' && startsWith(github.ref, 'refs/tags')
steps:
- name: Get wheels
uses: actions/download-artifact@v4
with:
path: artifacts
- name: Move to dist/
run: |
mkdir dist
find artifacts -name "*.whl" -exec mv '{}' dist/ \;
- name: Publish to PyPI
uses: pypa/[email protected]