move uncertainty task from episode 1 to episode 2

epiverse-trace · Mar 21, 2024 · 178d062 · 178d062
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diff --git a/episodes/delays-functions.Rmd b/episodes/delays-functions.Rmd
@@ -467,6 +467,8 @@ epinow_estimates <- epinow(
 plot(epinow_estimates)
 ```
 
+`{EpiNow2}` can also include the uncertainty around each summary statistic. We invite you to read this discussion on: [How to adapt `{epiparameter}` uncertainty entries to `{EpiNow2}`](https://github.com/epiverse-trace/epiparameter/discussions/218)? 
+
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diff --git a/episodes/delays-reuse.Rmd b/episodes/delays-reuse.Rmd
@@ -534,7 +534,7 @@ An interesting element is the `method_assess` nested entry, which refers to the
 covid_serialint$method_assess
 ```
 
-We will explore these concepts at the end!
+We will explore these concepts following episodes!
 
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@@ -545,20 +545,18 @@ We will explore these concepts at the end!
 
 A severity parameter like the duration of hospitalisation could add to the information needed about the bed capacity in response to an outbreak ([Cori et al., 2017](https://royalsocietypublishing.org/doi/10.1098/rstb.2016.0371)).
 
-Also, `{EpiNow2}` can also include the uncertainty around each summary statistic, like the standard deviation of the standard deviation.
+<!-- Also, `{EpiNow2}` can also include the uncertainty around each summary statistic, like the standard deviation of the standard deviation. -->
 
 For Ebola: 
 
-- What is the reported *point estimate* and *uncertainty* of the mean duration of health care and case isolation?
+- What is the reported *point estimate* of the mean duration of health care and case isolation?
 
 ::::::::::::::::: hint
 
 An informative delay should measure the time from symptom onset to recovery or death.
 
 Find a way to access the whole `{epiparameter}` database and find how that delay may be stored.
 
-Explore within `<epidist>$summary_stats$...`.
-
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@@ -577,14 +575,17 @@ ebola_severity <- epidist_db(
 
 # point estimate
 ebola_severity$summary_stats$mean
+```
+
+Check that for some `{epiparameter}` entries you will also have the *uncertainty* around the *point estimate* of each summary statistic:
+
+```{r}
 # 95% confidence intervals
 ebola_severity$summary_stats$mean_ci
 # limits of the confidence intervals
 ebola_severity$summary_stats$mean_ci_limits
 ```
 
-We invite you to read this discussion on: [How to adapt `{epiparamter}` uncertainty entries to `{EpiNow2}`](https://github.com/epiverse-trace/epiparameter/discussions/218)? 
-
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