compare speed 6 #12

	name: render readme + docker

	on:
	workflow_dispatch:
	push:
	branches:
	- "docker"
	paths:
	- 'README.Rmd'
	- '.github/workflows/render_readme.yml'
	- '.github/workflows/render_readme_docker.yml'

	concurrency:
	group: ${{ github.workflow }}-${{ github.ref }}
	cancel-in-progress: true

	jobs:
	render-readme:
	runs-on: ubuntu-latest
	container: bahadzie/alpine-r:4.3.0
	steps:
	- name: Checkout repos
	uses: actions/checkout@v4

	- name: Compile the readme
	run: \|
	writeLines(
	knitr::knit_expand(
	"README.Rmd",
	packagename = read.dcf("DESCRIPTION", "Package"),
	institution = read.dcf("DESCRIPTION", "Config/Institution"),
	department = read.dcf("DESCRIPTION", "Config/Department"),
	department_url = read.dcf("DESCRIPTION", "Config/DepartmentURL"),
	recon = read.dcf("DESCRIPTION", "Config/Recon"),
	recon_description = read.dcf("DESCRIPTION", "Config/ReconDescription"),
	gh_repo = Sys.getenv("GITHUB_REPOSITORY")
	),
	"README_expanded.Rmd"
	)
	rmarkdown::render(
	"README_expanded.Rmd",
	output_file = "README.md",
	output_dir = "."
	)
	shell: Rscript {0}


	commit-readme:
	needs: render-readme
	runs-on: ubuntu-latest
	steps:
	- name: Commit files
	run: \|
	git config --local user.email "[email protected]"
	git config --local user.name "GitHub Action"
	if ! git diff-index --quiet HEAD; then
	git add README.md
	# Also add README figures if they exist
	if [ -d man/figures ]
	then
	git add man/figures/
	fi
	git commit -m "Automatic readme update"
	git pull --rebase origin ${{ github.ref.name }}
	git push origin \|\| echo "No changes to push"
	fi
	shell: bash {0}

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