Fix coveralls reporting again #301
Workflow file for this run
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| name: linux | ||
| # Only build PRs, the main branch, and releases. | ||
| on: | ||
| pull_request: | ||
| push: | ||
| branches: | ||
| - main | ||
| release: | ||
| types: | ||
| - published | ||
| schedule: | ||
| - cron: "14 14 20 * *" | ||
| # Use bash by default in all jobs | ||
| defaults: | ||
| run: | ||
| # Using "-l {0}" is necessary for conda environments to be activated | ||
| # But this breaks on MacOS if using actions/setup-python: | ||
| # https://github.com/actions/setup-python/issues/132 | ||
| shell: bash | ||
| # Cancel any previous run of the test job. | ||
| concurrency: | ||
| group: ${{ github.workflow }}-${{ github.ref }} | ||
| cancel-in-progress: true | ||
| jobs: | ||
| test: | ||
| name: ${{ matrix.case.os }} py${{ matrix.case.python-version }} ${{ matrix.case.name }} | ||
| runs-on: ${{ matrix.case.os }}-latest | ||
| strategy: | ||
| fail-fast: false | ||
| matrix: | ||
| os: [ubuntu, ] # macos, windows] # Only Linux currently. | ||
| case: | ||
| - python-version: "3.9" | ||
| name: minimal | ||
| os: ubuntu | ||
| conda: "'numba=0.53' 'scipy=1.9' scooby libdlf" | ||
| test: "" | ||
| - python-version: "3.10" | ||
| name: plain | ||
| os: ubuntu | ||
| conda: "numba scipy scooby libdlf" | ||
| test: "" | ||
| - python-version: "3.10" | ||
| name: full | ||
| os: ubuntu | ||
| conda: "numba scipy scooby libdlf matplotlib pytest-mpl" | ||
| test: "--mpl" | ||
| - python-version: "3.11" | ||
| name: plain | ||
| os: ubuntu | ||
| conda: "numba scipy scooby libdlf" | ||
| test: "" | ||
| - python-version: "3.11" | ||
| name: full | ||
| os: ubuntu | ||
| conda: "numba scipy scooby libdlf matplotlib pytest-mpl" | ||
| test: "--mpl" | ||
| - python-version: "3.12" | ||
| name: plain | ||
| os: ubuntu | ||
| conda: "numba scipy scooby libdlf" | ||
| test: "" | ||
| - python-version: "3.12" | ||
| name: full | ||
| os: ubuntu | ||
| conda: "numba scipy scooby libdlf matplotlib pytest-mpl" | ||
| test: "--mpl" | ||
| env: | ||
| # Used for coveralls flag | ||
| OS: ${{ matrix.case.os }} | ||
| PYTHON: ${{ matrix.case.python-version }} | ||
| steps: | ||
| # Checks-out your repository under $GITHUB_WORKSPACE | ||
| - name: Checkout | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| # Need to fetch more than the last commit so that setuptools-scm can | ||
| # create the correct version string. If the number of commits since | ||
| # the last release is greater than this, the version still be wrong. | ||
| # Increase if necessary. | ||
| fetch-depth: 100 | ||
| # The GitHub token is preserved by default but this job doesn't need | ||
| # to be able to push to GitHub. | ||
| persist-credentials: false | ||
| # Need the tags so that setuptools-scm can form a valid version number | ||
| - name: Fetch git tags | ||
| run: git fetch origin 'refs/tags/*:refs/tags/*' | ||
| - name: Setup miniconda | ||
| uses: conda-incubator/setup-miniconda@v3 | ||
| with: | ||
| auto-update-conda: true | ||
| python-version: ${{ matrix.case.python-version }} | ||
| miniforge-version: "latest" | ||
| miniforge-variant: Mambaforge | ||
| use-mamba: true | ||
| - name: Install dependencies | ||
| shell: bash -l {0} | ||
| run: | | ||
| conda config --set always_yes yes --set changeps1 no | ||
| conda config --show-sources | ||
| conda config --show | ||
| conda info -a | ||
| conda install ${{ matrix.case.conda }} pytest pytest-cov pytest-console-scripts coveralls flake8 setuptools-scm | ||
| - name: Conda list | ||
| shell: bash -l {0} | ||
| run: conda list | ||
| - name: Flake8 | ||
| shell: bash -l {0} | ||
| run: flake8 docs/conf.py setup.py empymod/ tests/ examples/ | ||
| - name: Test with pytest | ||
| shell: bash -l {0} | ||
| run: | | ||
| python -m pip install . | ||
| cp ./tests/matplotlibrc ./. | ||
| pytest --cov=empymod ${{ matrix.case.test }} | ||
| - name: Coveralls | ||
| # [pin @develop@20230609] | ||
| uses: AndreMiras/coveralls-python-action@65c1672f0b8a201702d86c81b79187df74072505 | ||
| with: | ||
| parallel: true | ||
| flag-name: ${{ matrix.case.python-version }} ${{ matrix.case.name }} (${{ matrix.case.os }}) | ||
| coveralls_finish: | ||
| needs: test | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - name: Coveralls Finished | ||
| # [pin @develop@20230609] | ||
| uses: AndreMiras/coveralls-python-action@65c1672f0b8a201702d86c81b79187df74072505 | ||
| with: | ||
| parallel-finished: true | ||
| deploy: | ||
| needs: test | ||
| name: Deploy to PyPI | ||
| runs-on: ubuntu-latest | ||
| # Only from the origin repository, not forks; only main and tags. | ||
| if: github.repository_owner == 'emsig' && (github.ref == 'refs/heads/main' || startsWith(github.ref, 'refs/tags/')) | ||
| steps: | ||
| # Checks-out your repository under $GITHUB_WORKSPACE | ||
| - name: Checkout | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| # Need to fetch more than the last commit so that setuptools-scm can | ||
| # create the correct version string. If the number of commits since | ||
| # the last release is greater than this, the version will still be | ||
| # wrong. Increase if necessary. | ||
| fetch-depth: 100 | ||
| # The GitHub token is preserved by default but this job doesn't need | ||
| # to be able to push to GitHub. | ||
| persist-credentials: false | ||
| # Need the tags so that setuptools-scm can form a valid version number | ||
| - name: Fetch git tags | ||
| run: git fetch origin 'refs/tags/*:refs/tags/*' | ||
| - name: Setup Python | ||
| uses: actions/setup-python@v5 | ||
| with: | ||
| python-version: "3.11" | ||
| - name: Install dependencies | ||
| run: | | ||
| python -m pip install --upgrade pip | ||
| python -m pip install build setuptools-scm | ||
| - name: Build source and wheel distributions | ||
| if: github.ref == 'refs/heads/main' | ||
| run: | | ||
| # Change setuptools-scm local_scheme to "no-local-version" so the | ||
| # local part of the version isn't included, making the version string | ||
| # compatible with Test PyPI. | ||
| sed --in-place 's/"root"/"local_scheme":"no-local-version","root"/g' setup.py | ||
| - name: Build source and wheel distributions | ||
| run: | | ||
| # Build source and wheel packages | ||
| python -m build | ||
| echo "" | ||
| echo "Generated files:" | ||
| ls -lh dist/ | ||
| - name: Publish to Test PyPI | ||
| if: success() | ||
| uses: pypa/gh-action-pypi-publish@release/v1 | ||
| with: | ||
| user: __token__ | ||
| password: ${{ secrets.TEST_PYPI_PASSWORD }} | ||
| repository_url: https://test.pypi.org/legacy/ | ||
| # Allow existing releases on test PyPI without errors. | ||
| # NOT TO BE USED in PyPI! | ||
| skip_existing: true | ||
| - name: Publish to PyPI | ||
| # Only for releases | ||
| if: success() && github.event_name == 'release' | ||
| uses: pypa/gh-action-pypi-publish@release/v1 | ||
| with: | ||
| user: __token__ | ||
| password: ${{ secrets.PYPI_PASSWORD }} | ||
