This repository contains the scripts used to generate simulated datasets and compare them using convolutional neural network (CNN) from Fonseca et al. (Fonseca EM, Colli GR, Werneck FP, Carstens BC. Phylogeographic model selection using convolutional neural networks. In review).
Prepring available at: https://www.biorxiv.org/content/10.1101/2020.09.11.291856v1
Note that after the simulation procedure, the script entitled "Creating_cnn_folder" should be used to construct the input folder for CNN analysis.
Before making them available, scripts were tested on a mac (Mac mini, 1.6 GHz Intel Core i5, 8GB RAM, 2 cores).
If you have any questions, please email [email protected].