Update cy_resources.md (#1226)

* Update cy_resources.md * Update cy_resources.md * Update cy_resources.md * Update cy_resources.md * Fix GitHub Action * typos * add coordinator * add to side bar + news article * Update CONTRIBUTORS.yaml * Update CONTRIBUTORS.yaml * update contributors --------- Co-authored-by: Bert Droesbeke <[email protected]> Co-authored-by: bedroesb <[email protected]>
elixir-europe · Aug 22, 2023 · 46baf46 · 46baf46
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diff --git a/_data/CONTRIBUTORS.yaml b/_data/CONTRIBUTORS.yaml
@@ -371,6 +371,23 @@ Anastasis Oulas:
     email: [email protected]
     git: aoulas
     affiliation: Cyprus Institute of Neurology & Genetics (CING)
+Nestoras Karathanasis:
+    orcid: 0000-0003-4119-0851
+    email: [email protected]
+    git: NestorasK
+    affiliation: Cyprus Institute of Neurology & Genetics (CING)
+George Spyrou:
+    orcid: 0000-0002-2470-3363
+    email: [email protected]
+    affiliation: Cyprus Institute of Neurology & Genetics (CING)
+Vasilis Promponas:
+    orcid: 0000-0003-3352-4831
+    email: [email protected]
+    affiliation: University of Cyprus (UCY)
+Nicolas Kylilis:
+    orcid: 0000-0001-7202-4827
+    email: [email protected]
+    affiliation: University of Cyprus (UCY)
 Heleri Inno:
     git: heleriinno
     email: [email protected]

diff --git a/_data/news.yml b/_data/news.yml
@@ -134,3 +134,7 @@
   date: 2023-08-18
   linked_pr: 1249
   description: "All items in the 'Relevant tools and resources' tables are now mentioned in the text. This means you have context of when it is appropriate to use each one. Tools and resources in the text will also feature a popup providing extra information about them. These changes means there is a new way to contribute tools: see our [new guidelines](tool_resource_update)!"
+- name: "New page: National resources Cyprus"
+  date: 2023-08-22
+  linked_pr: 1226
+  description: This page gives an insight in RDM on national level in Cyprus. [Discover the page here](cy_resources)
diff --git a/_data/sidebars/data_management.yml b/_data/sidebars/data_management.yml
@@ -136,6 +136,8 @@ subitems:
     subitems:
       - title: Belgium
         url: /be_resources
+      - title: Cyprus
+        url: /cy_resources
       - title: Czech Republic
         url: /cz_resources
       - title: Germany

diff --git a/pages/national_resources/cy_resources.md b/pages/national_resources/cy_resources.md
@@ -1,49 +1,21 @@
 ---
 
 title: Cyprus
-search_exclude: true
 country_code: CY
-contributors: [<!---REPLACE THIS with comma separated list of contributors--->]
-coordinators: [<!---REPLACE THIS with the name of data management coordinators of your ELIXIR node--->]
+contributors: [Anastasis Oulas, Nicolas Kylilis, Nestoras Karathanasis, George Spyrou, Vasilis Promponas]
+coordinators: [Anastasis Oulas]
 
 # Link to other pages in the tool assembly section on the RDMkit by listing the page_id 
 related_pages:
-  tool_assembly: [<!---REPLACE THIS with the page ID of the tool_assembly pages that you want to list here as related pages--->]
 
 training:
-  - name: Training in TeSS
-    registry: TeSS
-    url: <!--- https://tess.elixir-europe.org/materials?node=NODENAME --->
-  - name: ELIXIR NODENAME community in Zenodo
-    registry: Zenodo
-    url: <!--- https://zenodo.org/communities/elixir NODENAME --->
-  - name: ELIXIR NODENAME YouTube
-    registry: YouTube
-    url: <!--- URL of the channel --->
-  - name: <!---REPLACE THIS with the name of your training in registry or platform--->
-    registry: <!---REPLACE THIS with the name of the registry--->
-    url: <!---REPLACE THIS with the url of your training registry or platform--->
 
 # Refer to entries of the "main_tool_ and_resource_table" if institutions, organizations and projects from the country contribute to the development of international tools and resources. 
 ref_to_main_resources: 
-  -  <!---REPLACE THIS with the tool id--->
 
 # List here tools and resources mainly relevant for the specific country
 national_resources: 
-  - name: <!---REPLACE THIS with the national resources about RDM in life sciences such as local instances of tools, guidelines or regulations--->
-    description:
-    how_to_access: <!--- REPLACE THIS free text to explain if credentials, login, specific affiliations, etc., are needed to access the resource or tool--->
-    instance_of: <!--- REPLACE THIS with the tool id of which this resource is an instance of, taken from the all tools and resources file --->
-    related_pages:
-      tool_assembly: [<!---REPLACE THIS with the page ID of the tool_assembly pages that you want to list here as related pages--->]
-      your_domain: [<!---REPLACE THIS with the page ID of the domain pages that you want to list here as related pages--->]
-      your_role: [<!---REPLACE THIS with the page ID of the your_role pages that you want to list here as related pages--->]
-      your_tasks: [<!---REPLACE THIS with the page ID of the your_tasks pages that you want to list here as related pages--->]
-    url:
-    registry:
-      biotools: <!--- DELETE ME if not needed --->
-      fairsharing: <!--- DELETE ME if not needed --->
-      tess: <!--- DELETE ME if not needed --->
+
 ---
 <!---All the resources added above will appear on the table at the bottom of the page--->
 
@@ -53,12 +25,28 @@ national_resources:
 <!---Please focus on resources that are relevant for the whole country for life sciences--->
 
 ## Introduction 
-<!---General RDM considerations for your country, how to deal with RDM on a national level--->
+This page provides a general overview of national resources and initiatives on research data management (RDM) in Cyprus
 
 ## Funders
+The [Research and Innovation Foundation (RIF)](https://www.research.org.cy/en/) is the national authority in charge of supporting and promoting research, technological development and innovation in Cyprus.
 
 ## Regulations
-<!--- Ethical and legal regulations in the country, committees, etc. --->
+The [Cypurs National Policy of the Republic of Cyprus for Open Science Practices (PDF document)](https://www.dmrid.gov.cy/dmrid/research.nsf/All/877E9BEBAF67EE6CC2258859003DF656/$file/%CE%95%CE%B8%CE%BD%CE%B9%CE%BA%CE%AE%20%CE%A0%CE%BF%CE%BB%CE%B9%CF%84%CE%B9%CE%BA%CE%AE%20%CE%91%CE%BD%CE%BF%CE%B9%CE%BA%CF%84%CE%AE%CF%82%20%CE%95%CF%80%CE%B9%CF%83%CF%84%CE%AE%CE%BC%CE%B7%CF%82.pdf?) was recently revised to include research data management and planning.
+
+The [Cyprus National Bioethics Committee](http://www.bioethics.gov.cy/moh/cnbc/cnbc.nsf/index_en/index_en?OpenDocument) (document EEBK3). 
+All medical records and biological material are kept under secure conditions at a specially prepared 
+Biobank suite with absolute confidentiality and protection of sensitive data of personal character, 
+in compliance with the [European General Data Protection Regulation (GDPR)](https://gdpr.eu/what-is-gdpr/).
+
+## Domain-specific infrastructures or resources
+
+The [Cyprus National Initiatives for Open Science in Europe – NI4OS Europe](https://ni4os.eu/overview/), aims to be a core contributor to the [European Open Science Cloud (EOSC)](https://www.eosc-portal.eu/) service portfolio, commit to EOSC governance and ensure inclusiveness on the European level for enabling global Open Science
+
+The [Cyprus Institite of Neurology and Genetics (CING)](https://www.cing.ac.cy/) acted as a hub for COVID-19 data during the pandemic. CING was involved in biosample collection and high-throughput data analysis of samples using Next Generation Sequencing (NGS).
 
-## Domain-specific infrastructures or resources 
-<!--- e.g. human data, covid-19. Please, only add domain-specific resources that you think don't fit in the table at the bottom--->
+The development of the [Cyprus Biobank](http://www.biobank.cy/) came with the success in funding by the European Commission in the framework of 
+program H2020-WIDESPREAD-01-2018-2019: Teaming Phase 2, for €15mi for 7 years. 
+The project is entitled: Biobanking and the Cyprus Human Genome Project. The project 
+is supplemented by another €15mi by the Government of Cyprus and another €8mi by the 
+University of Cyprus for a duration of 15 years, October 1, 2019 to September 30, 2034. 
+It aims to upgrade the current infrastructure into a Center of Excellence in Biobanking and Biomedical Research.