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30 Open 35 Closed
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Issues list

interpretation of bacteria pangenome graphs
#123 opened Sep 19, 2024 by jianshu93
6
please add a possibility to restrict the disk usage of seqwish
#122 opened Feb 29, 2024 by subwaystation
Genome graph induced from wfmash+seqwish is still biased
#121 opened Jan 25, 2024 by yihangs
3
Does seqwish supports output with nodes as single characters?
#120 opened Jan 5, 2024 by YX-Xiang
2
Building Seqwish on macOS
#117 opened Nov 10, 2023 by kojix2
Dead end nodes of 0 length
#116 opened Sep 27, 2023 by casper-schutte
1
error: no member named 'parallel' in namespace 'ips4o'
#114 opened Jul 21, 2023 by yurivict
2
abnormal alignments
#109 opened Feb 20, 2023 by sdws1983
16
Graph to Graph Alignment
#108 opened Nov 29, 2022 by 8banzhuan
5
[FEATURE]: seqwish can emit GBZ format
#91 opened Jan 4, 2022 by subwaystation
[FEATURE]: seqwish can handle agc compressed whole genome assemblies
#90 opened Jan 4, 2022 by subwaystation
seqwish output with simulated data
#69 opened Dec 4, 2020 by egoltsman
1
vg msga quite slow with 20 1Mb genomes
#68 opened Nov 10, 2020 by bredelings
4
Error processsing large PAF files from minimap2
#67 opened Oct 5, 2020 by brettChapman
23
Question: How to recover "colors" from the graph?
#57 opened Jul 17, 2020 by phiweger
7
High memory usage when using '-r 1'
#53 opened Jun 10, 2020 by jmonlong
1
easy ways to speed up large parallel runs
#46 opened Apr 24, 2020 by ekg
automatic docker generation
#38 opened Apr 6, 2020 by SilasK
1
two genome comprison
#35 opened Mar 20, 2020 by YaoZhou89
6
Length assertion exception during GFA generation.
#28 opened Nov 14, 2019 by darcyabjones
7
seqwish should clean up after itself
#22 opened Sep 13, 2019 by ekg
seqwish crashes on chrom21 for 3 hgsvc samples
#18 opened Jul 8, 2019 by glennhickey
4
bsort bad link
#17 opened Jul 1, 2019 by bh9
1
reducing memory usage further
#13 opened Apr 25, 2019 by ekg
softmasked bases
#11 opened Mar 27, 2019 by ekg
ProTip! Exclude everything labeled bug with -label:bug.