Updating to v0.9.98

- Fixed potential problem with recognition of _R1. or _R1_ patterns in filenames
- Support for FastQC v0.12.1 update (s-andrews/FastQC@fbd9cf5)
- Speed up QC step during cleaning step
- If the user provides a clustering threshold with `--cl_min_identity` then the miscellaneous DNA extraction is performed using the same identity.
- Allow decimals in maximum average number of copies in a cluster via `--cl_max_copies`
- Minor cosmetic improvements


Former-commit-id: 1fa9322

README.md

@@ -86,7 +86,7 @@ And if the program was correctly installed you will see the main help page of Ca
 ```text
 usage: captus_assembly command [options]
 
-Captus 0.9.96: Assembly of Phylogenomic Datasets from High-Throughput Sequencing data
+Captus 0.9.98: Assembly of Phylogenomic Datasets from High-Throughput Sequencing data
 
 Captus-assembly commands:
   command     Program commands (in typical order of execution)