Merge pull request #26 from ashiklom/python-example

Complete EML parts of Python logistic example
eco4cast · Oct 6, 2022 · 2ba23ed · 2ba23ed
2 parents 95b55bd + 30160d1
commit 2ba23ed
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diff --git a/.github/workflows/R-CMD-check.yaml b/.github/workflows/R-CMD-check.yaml
@@ -48,7 +48,8 @@ jobs:
             eval sudo $cmd
           done < <(Rscript -e 'writeLines(remotes::system_requirements("ubuntu", "20.04"))')
 
-      - name: Install Miniconda
+      - name: Install Python dependencies
+        run: reticulate::py_install(c("numpy", "matplotlib", "NetCDF4", "pandas", "dicttoxml"))
         shell: Rscript {0}
         run: |
           reticulate::install_miniconda()

diff --git a/.github/workflows/pkgdown.yaml b/.github/workflows/pkgdown.yaml
@@ -23,11 +23,17 @@ jobs:
         with:
           use-public-rspm: true
 
+
+      - name: Install Python dependencies
+        run: reticulate::py_install(c("numpy", "matplotlib", "NetCDF4", "pandas", "dicttoxml"))
+        shell: Rscript {0}
+
       - uses: r-lib/actions/setup-r-dependencies@v1
         with:
           extra-packages: pkgdown
           needs: website
 
+
       - name: Install Miniconda
         shell: Rscript {0}
         run: |

diff --git a/DESCRIPTION b/DESCRIPTION
@@ -44,6 +44,7 @@ Config/reticulate:
      list(package = "numpy"),
      list(package = "matplotlib"),
      list(package = "NetCDF4"),
-     list(package = "pandas")
+     list(package = "pandas"),
+     list(package = "dicttoxml")
    )
  )