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11 Open 18 Closed
11 Open 18 Closed
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Issues list

Scrublet failing on certain dataset
#134 opened May 31, 2024 by anilthanki
Highly variable genes calculations should allow to blacklist or white list specific subset of genes
#129 opened Feb 12, 2024 by pcm32
Scrublet double prediction fails with cells with under 5 expressed genes
#125 opened Jan 23, 2024 by pcm32
Scrubblet module fails when running with less than 30 cells
#124 opened Oct 30, 2023 by pcm32
Using a single group in find marker genes fails
#123 opened Apr 20, 2023 by pcm32
Add filtering by quantiles
#122 opened Mar 27, 2023 by pcm32
PlotEmbedd could give more user friendly errors to allow users to recover
#121 opened Mar 10, 2023 by pcm32
Should we add ability to mark ribosomal genes?
#119 opened Nov 18, 2022 by pcm32
How can I use scanpy_scripts?
#118 opened Oct 9, 2022 by cooperist
3
Calculations of mito directly generate columns with dtypes that break qc calculations on subsequent filtering
#116 opened Sep 21, 2022 by pcm32
3
Problems with Python 3.9.* - umap-learn<0.4.0 needed?
#102 opened Jul 12, 2021 by LustigePerson
3
ProTip! Exclude everything labeled bug with -label:bug.