changes

bookdown/10-validation.Rmd

@@ -0,0 +1,7 @@
+# Validation
+
+The traditional method for validation of LandTrendr segmentation and derived disturbance maps is the TimeSync application ([paper](https://larse.forestry.oregonstate.edu/sites/larse/files/pub_pdfs/Cohen_etal_2010.pdf)).
+
+Please see this GitHub [repository](https://github.com/eMapR/TimeSync-Legacy) for all the files and instructions you need to get source data from Google Earth Engine and run the desktop Legacy version of the application.
+
+<img src='timesync-legacy.jpg'>

bookdown/11-references.Rmd → bookdown/12-references.Rmd

@@ -1,5 +1,8 @@
 # References
 
+
+>[Cohen, W. B., Yang, Z., & Kennedy, R. (2010). Detecting trends in forest disturbance and recovery using yearly Landsat time series: 2. TimeSync-Tools for calibration and validation. Remote Sensing of Environment, 114(12), 2911-2924.](https://larse.forestry.oregonstate.edu/sites/larse/files/pub_pdfs/Cohen_etal_2010.pdf)
+
 >[Gorelick, N., Hancher, M., Dixon, M., Ilyushchenko, S., Thau, D., & Moore, R. (2017). Google Earth Engine: Planetary-scale geospatial analysis for everyone. Remote Sensing of Environment, 202, 18-27.](https://www.sciencedirect.com/science/article/pii/S0034425717302900)
 
 >[Kennedy, R. E., Yang, Z., & Cohen, W. B. (2010). Detecting trends in forest disturbance and recovery using yearly Landsat time series: 1. LandTrendr—Temporal segmentation algorithms. Remote Sensing of Environment, 114(12), 2897-2910.](http://geotrendr.ceoas.oregonstate.edu/files/2015/05/Kennedy_etal2010.pdf)

bookdown/index.Rmd

@@ -16,7 +16,11 @@ output:
     css: style.css
 ---
 
-# LT-GEE {-}
+# LT-GEE Documentation{-}
+
+*By [Justin Braaten](https://github.com/jdbcode) and Oregon State University's [eMapR Lab](http://emapr.ceoas.oregonstate.edu/)*
+
+*2018/06/08*
 
 #### LandTrendr (Landsat-based detection of trends in disturbance and recovery) implementation on the Google Earth Engine platform {-}
 

docs/example-scripts.html

@@ -101,7 +101,7 @@
 <li><strong><a href="./">LT-GEE Documentation</a></strong></li>
 
 <li class="divider"></li>
-<li class="chapter" data-level="" data-path="index.html"><a href="index.html"><i class="fa fa-check"></i>LT-GEE</a></li>
+<li class="chapter" data-level="" data-path="index.html"><a href="index.html"><i class="fa fa-check"></i>LT-GEE Documentation</a></li>
 <li class="chapter" data-level="1" data-path="introduction.html"><a href="introduction.html"><i class="fa fa-check"></i><b>1</b> Introduction</a></li>
 <li class="chapter" data-level="2" data-path="landtrendr.html"><a href="landtrendr.html"><i class="fa fa-check"></i><b>2</b> LandTrendr</a><ul>
 <li class="chapter" data-level="2.1" data-path="landtrendr.html"><a href="landtrendr.html#fit-to-vertex-image-data"><i class="fa fa-check"></i><b>2.1</b> Fit-to-Vertex Image Data</a></li>
@@ -146,8 +146,9 @@
 <li class="chapter" data-level="9.1.2" data-path="shortcut-functions.html"><a href="shortcut-functions.html#buildltcollection"><i class="fa fa-check"></i><b>9.1.2</b> buildLTcollection</a></li>
 </ul></li>
 </ul></li>
-<li class="chapter" data-level="10" data-path="faq.html"><a href="faq.html"><i class="fa fa-check"></i><b>10</b> FAQ</a></li>
-<li class="chapter" data-level="11" data-path="references.html"><a href="references.html"><i class="fa fa-check"></i><b>11</b> References</a></li>
+<li class="chapter" data-level="10" data-path="validation.html"><a href="validation.html"><i class="fa fa-check"></i><b>10</b> Validation</a></li>
+<li class="chapter" data-level="11" data-path="faq.html"><a href="faq.html"><i class="fa fa-check"></i><b>11</b> FAQ</a></li>
+<li class="chapter" data-level="12" data-path="references.html"><a href="references.html"><i class="fa fa-check"></i><b>12</b> References</a></li>
 <li class="divider"></li>
 <li><a href="https://github.com/rstudio/bookdown" target="blank">Published with bookdown</a></li>
 

docs/faq.html

@@ -30,7 +30,7 @@
   <meta name="apple-mobile-web-app-status-bar-style" content="black">
 
 
-<link rel="prev" href="shortcut-functions.html">
+<link rel="prev" href="validation.html">
 <link rel="next" href="references.html">
 <script src="libs/jquery-2.2.3/jquery.min.js"></script>
 <link href="libs/gitbook-2.6.7/css/style.css" rel="stylesheet" />
@@ -101,7 +101,7 @@
 <li><strong><a href="./">LT-GEE Documentation</a></strong></li>
 
 <li class="divider"></li>
-<li class="chapter" data-level="" data-path="index.html"><a href="index.html"><i class="fa fa-check"></i>LT-GEE</a></li>
+<li class="chapter" data-level="" data-path="index.html"><a href="index.html"><i class="fa fa-check"></i>LT-GEE Documentation</a></li>
 <li class="chapter" data-level="1" data-path="introduction.html"><a href="introduction.html"><i class="fa fa-check"></i><b>1</b> Introduction</a></li>
 <li class="chapter" data-level="2" data-path="landtrendr.html"><a href="landtrendr.html"><i class="fa fa-check"></i><b>2</b> LandTrendr</a><ul>
 <li class="chapter" data-level="2.1" data-path="landtrendr.html"><a href="landtrendr.html#fit-to-vertex-image-data"><i class="fa fa-check"></i><b>2.1</b> Fit-to-Vertex Image Data</a></li>
@@ -146,8 +146,9 @@
 <li class="chapter" data-level="9.1.2" data-path="shortcut-functions.html"><a href="shortcut-functions.html#buildltcollection"><i class="fa fa-check"></i><b>9.1.2</b> buildLTcollection</a></li>
 </ul></li>
 </ul></li>
-<li class="chapter" data-level="10" data-path="faq.html"><a href="faq.html"><i class="fa fa-check"></i><b>10</b> FAQ</a></li>
-<li class="chapter" data-level="11" data-path="references.html"><a href="references.html"><i class="fa fa-check"></i><b>11</b> References</a></li>
+<li class="chapter" data-level="10" data-path="validation.html"><a href="validation.html"><i class="fa fa-check"></i><b>10</b> Validation</a></li>
+<li class="chapter" data-level="11" data-path="faq.html"><a href="faq.html"><i class="fa fa-check"></i><b>11</b> FAQ</a></li>
+<li class="chapter" data-level="12" data-path="references.html"><a href="references.html"><i class="fa fa-check"></i><b>12</b> References</a></li>
 <li class="divider"></li>
 <li><a href="https://github.com/rstudio/bookdown" target="blank">Published with bookdown</a></li>
 
@@ -169,7 +170,7 @@ <h1>
 
             <section class="normal" id="section-">
 <div id="faq" class="section level1">
-<h1><span class="header-section-number">10</span> FAQ</h1>
+<h1><span class="header-section-number">11</span> FAQ</h1>
 <blockquote>
 <p>Q: I have read or heard that <code>for</code> loops and client-side conditionals like <code>if</code> statements are GEE no-nos, yet you include them in your example scripts. What’s the deal?<br><br>A: <em>We don’t mix server-side and client-side objects and operations, which, as we understand it, are the main issues. We are also not GEE wizards, so please, we are calling on everyone to help make better, more GEE-friendly template scripts to share.</em></p>
 </blockquote>
@@ -180,7 +181,7 @@ <h1><span class="header-section-number">10</span> FAQ</h1>
           </div>
         </div>
       </div>
-<a href="shortcut-functions.html" class="navigation navigation-prev " aria-label="Previous page"><i class="fa fa-angle-left"></i></a>
+<a href="validation.html" class="navigation navigation-prev " aria-label="Previous page"><i class="fa fa-angle-left"></i></a>
 <a href="references.html" class="navigation navigation-next " aria-label="Next page"><i class="fa fa-angle-right"></i></a>
     </div>
   </div>

docs/index.html

@@ -101,7 +101,7 @@
 <li><strong><a href="./">LT-GEE Documentation</a></strong></li>
 
 <li class="divider"></li>
-<li class="chapter" data-level="" data-path="index.html"><a href="index.html"><i class="fa fa-check"></i>LT-GEE</a></li>
+<li class="chapter" data-level="" data-path="index.html"><a href="index.html"><i class="fa fa-check"></i>LT-GEE Documentation</a></li>
 <li class="chapter" data-level="1" data-path="introduction.html"><a href="introduction.html"><i class="fa fa-check"></i><b>1</b> Introduction</a></li>
 <li class="chapter" data-level="2" data-path="landtrendr.html"><a href="landtrendr.html"><i class="fa fa-check"></i><b>2</b> LandTrendr</a><ul>
 <li class="chapter" data-level="2.1" data-path="landtrendr.html"><a href="landtrendr.html#fit-to-vertex-image-data"><i class="fa fa-check"></i><b>2.1</b> Fit-to-Vertex Image Data</a></li>
@@ -146,8 +146,9 @@
 <li class="chapter" data-level="9.1.2" data-path="shortcut-functions.html"><a href="shortcut-functions.html#buildltcollection"><i class="fa fa-check"></i><b>9.1.2</b> buildLTcollection</a></li>
 </ul></li>
 </ul></li>
-<li class="chapter" data-level="10" data-path="faq.html"><a href="faq.html"><i class="fa fa-check"></i><b>10</b> FAQ</a></li>
-<li class="chapter" data-level="11" data-path="references.html"><a href="references.html"><i class="fa fa-check"></i><b>11</b> References</a></li>
+<li class="chapter" data-level="10" data-path="validation.html"><a href="validation.html"><i class="fa fa-check"></i><b>10</b> Validation</a></li>
+<li class="chapter" data-level="11" data-path="faq.html"><a href="faq.html"><i class="fa fa-check"></i><b>11</b> FAQ</a></li>
+<li class="chapter" data-level="12" data-path="references.html"><a href="references.html"><i class="fa fa-check"></i><b>12</b> References</a></li>
 <li class="divider"></li>
 <li><a href="https://github.com/rstudio/bookdown" target="blank">Published with bookdown</a></li>
 
@@ -170,8 +171,10 @@ <h1>
             <section class="normal" id="section-">
 <!--bookdown:title:end-->
 <!--bookdown:title:start-->
-<div id="lt-gee" class="section level1 unnumbered">
-<h1>LT-GEE</h1>
+<div id="lt-gee-documentation" class="section level1 unnumbered">
+<h1>LT-GEE Documentation</h1>
+<p><em>By <a href="https://github.com/jdbcode">Justin Braaten</a> and Oregon State University’s <a href="http://emapr.ceoas.oregonstate.edu/">eMapR Lab</a></em></p>
+<p><em>2018/06/08</em></p>
 <div id="landtrendr-landsat-based-detection-of-trends-in-disturbance-and-recovery-implementation-on-the-google-earth-engine-platform" class="section level4 unnumbered">
 <h4>LandTrendr (Landsat-based detection of trends in disturbance and recovery) implementation on the Google Earth Engine platform</h4>
 <p><img src='imgs/lt_gee_symbols.png'></p>

docs/introduction.html

@@ -101,7 +101,7 @@
 <li><strong><a href="./">LT-GEE Documentation</a></strong></li>
 
 <li class="divider"></li>
-<li class="chapter" data-level="" data-path="index.html"><a href="index.html"><i class="fa fa-check"></i>LT-GEE</a></li>
+<li class="chapter" data-level="" data-path="index.html"><a href="index.html"><i class="fa fa-check"></i>LT-GEE Documentation</a></li>
 <li class="chapter" data-level="1" data-path="introduction.html"><a href="introduction.html"><i class="fa fa-check"></i><b>1</b> Introduction</a></li>
 <li class="chapter" data-level="2" data-path="landtrendr.html"><a href="landtrendr.html"><i class="fa fa-check"></i><b>2</b> LandTrendr</a><ul>
 <li class="chapter" data-level="2.1" data-path="landtrendr.html"><a href="landtrendr.html#fit-to-vertex-image-data"><i class="fa fa-check"></i><b>2.1</b> Fit-to-Vertex Image Data</a></li>
@@ -146,8 +146,9 @@
 <li class="chapter" data-level="9.1.2" data-path="shortcut-functions.html"><a href="shortcut-functions.html#buildltcollection"><i class="fa fa-check"></i><b>9.1.2</b> buildLTcollection</a></li>
 </ul></li>
 </ul></li>
-<li class="chapter" data-level="10" data-path="faq.html"><a href="faq.html"><i class="fa fa-check"></i><b>10</b> FAQ</a></li>
-<li class="chapter" data-level="11" data-path="references.html"><a href="references.html"><i class="fa fa-check"></i><b>11</b> References</a></li>
+<li class="chapter" data-level="10" data-path="validation.html"><a href="validation.html"><i class="fa fa-check"></i><b>10</b> Validation</a></li>
+<li class="chapter" data-level="11" data-path="faq.html"><a href="faq.html"><i class="fa fa-check"></i><b>11</b> FAQ</a></li>
+<li class="chapter" data-level="12" data-path="references.html"><a href="references.html"><i class="fa fa-check"></i><b>12</b> References</a></li>
 <li class="divider"></li>
 <li><a href="https://github.com/rstudio/bookdown" target="blank">Published with bookdown</a></li>
 

docs/landtrendr.html

@@ -101,7 +101,7 @@
 <li><strong><a href="./">LT-GEE Documentation</a></strong></li>
 
 <li class="divider"></li>
-<li class="chapter" data-level="" data-path="index.html"><a href="index.html"><i class="fa fa-check"></i>LT-GEE</a></li>
+<li class="chapter" data-level="" data-path="index.html"><a href="index.html"><i class="fa fa-check"></i>LT-GEE Documentation</a></li>
 <li class="chapter" data-level="1" data-path="introduction.html"><a href="introduction.html"><i class="fa fa-check"></i><b>1</b> Introduction</a></li>
 <li class="chapter" data-level="2" data-path="landtrendr.html"><a href="landtrendr.html"><i class="fa fa-check"></i><b>2</b> LandTrendr</a><ul>
 <li class="chapter" data-level="2.1" data-path="landtrendr.html"><a href="landtrendr.html#fit-to-vertex-image-data"><i class="fa fa-check"></i><b>2.1</b> Fit-to-Vertex Image Data</a></li>
@@ -146,8 +146,9 @@
 <li class="chapter" data-level="9.1.2" data-path="shortcut-functions.html"><a href="shortcut-functions.html#buildltcollection"><i class="fa fa-check"></i><b>9.1.2</b> buildLTcollection</a></li>
 </ul></li>
 </ul></li>
-<li class="chapter" data-level="10" data-path="faq.html"><a href="faq.html"><i class="fa fa-check"></i><b>10</b> FAQ</a></li>
-<li class="chapter" data-level="11" data-path="references.html"><a href="references.html"><i class="fa fa-check"></i><b>11</b> References</a></li>
+<li class="chapter" data-level="10" data-path="validation.html"><a href="validation.html"><i class="fa fa-check"></i><b>10</b> Validation</a></li>
+<li class="chapter" data-level="11" data-path="faq.html"><a href="faq.html"><i class="fa fa-check"></i><b>11</b> FAQ</a></li>
+<li class="chapter" data-level="12" data-path="references.html"><a href="references.html"><i class="fa fa-check"></i><b>12</b> References</a></li>
 <li class="divider"></li>
 <li><a href="https://github.com/rstudio/bookdown" target="blank">Published with bookdown</a></li>
 

docs/lt-gee-outputs.html

@@ -101,7 +101,7 @@
 <li><strong><a href="./">LT-GEE Documentation</a></strong></li>
 
 <li class="divider"></li>
-<li class="chapter" data-level="" data-path="index.html"><a href="index.html"><i class="fa fa-check"></i>LT-GEE</a></li>
+<li class="chapter" data-level="" data-path="index.html"><a href="index.html"><i class="fa fa-check"></i>LT-GEE Documentation</a></li>
 <li class="chapter" data-level="1" data-path="introduction.html"><a href="introduction.html"><i class="fa fa-check"></i><b>1</b> Introduction</a></li>
 <li class="chapter" data-level="2" data-path="landtrendr.html"><a href="landtrendr.html"><i class="fa fa-check"></i><b>2</b> LandTrendr</a><ul>
 <li class="chapter" data-level="2.1" data-path="landtrendr.html"><a href="landtrendr.html#fit-to-vertex-image-data"><i class="fa fa-check"></i><b>2.1</b> Fit-to-Vertex Image Data</a></li>
@@ -146,8 +146,9 @@
 <li class="chapter" data-level="9.1.2" data-path="shortcut-functions.html"><a href="shortcut-functions.html#buildltcollection"><i class="fa fa-check"></i><b>9.1.2</b> buildLTcollection</a></li>
 </ul></li>
 </ul></li>
-<li class="chapter" data-level="10" data-path="faq.html"><a href="faq.html"><i class="fa fa-check"></i><b>10</b> FAQ</a></li>
-<li class="chapter" data-level="11" data-path="references.html"><a href="references.html"><i class="fa fa-check"></i><b>11</b> References</a></li>
+<li class="chapter" data-level="10" data-path="validation.html"><a href="validation.html"><i class="fa fa-check"></i><b>10</b> Validation</a></li>
+<li class="chapter" data-level="11" data-path="faq.html"><a href="faq.html"><i class="fa fa-check"></i><b>11</b> FAQ</a></li>
+<li class="chapter" data-level="12" data-path="references.html"><a href="references.html"><i class="fa fa-check"></i><b>12</b> References</a></li>
 <li class="divider"></li>
 <li><a href="https://github.com/rstudio/bookdown" target="blank">Published with bookdown</a></li>
 

docs/lt-gee-requirements.html

@@ -101,7 +101,7 @@
 <li><strong><a href="./">LT-GEE Documentation</a></strong></li>
 
 <li class="divider"></li>
-<li class="chapter" data-level="" data-path="index.html"><a href="index.html"><i class="fa fa-check"></i>LT-GEE</a></li>
+<li class="chapter" data-level="" data-path="index.html"><a href="index.html"><i class="fa fa-check"></i>LT-GEE Documentation</a></li>
 <li class="chapter" data-level="1" data-path="introduction.html"><a href="introduction.html"><i class="fa fa-check"></i><b>1</b> Introduction</a></li>
 <li class="chapter" data-level="2" data-path="landtrendr.html"><a href="landtrendr.html"><i class="fa fa-check"></i><b>2</b> LandTrendr</a><ul>
 <li class="chapter" data-level="2.1" data-path="landtrendr.html"><a href="landtrendr.html#fit-to-vertex-image-data"><i class="fa fa-check"></i><b>2.1</b> Fit-to-Vertex Image Data</a></li>
@@ -146,8 +146,9 @@
 <li class="chapter" data-level="9.1.2" data-path="shortcut-functions.html"><a href="shortcut-functions.html#buildltcollection"><i class="fa fa-check"></i><b>9.1.2</b> buildLTcollection</a></li>
 </ul></li>
 </ul></li>
-<li class="chapter" data-level="10" data-path="faq.html"><a href="faq.html"><i class="fa fa-check"></i><b>10</b> FAQ</a></li>
-<li class="chapter" data-level="11" data-path="references.html"><a href="references.html"><i class="fa fa-check"></i><b>11</b> References</a></li>
+<li class="chapter" data-level="10" data-path="validation.html"><a href="validation.html"><i class="fa fa-check"></i><b>10</b> Validation</a></li>
+<li class="chapter" data-level="11" data-path="faq.html"><a href="faq.html"><i class="fa fa-check"></i><b>11</b> FAQ</a></li>
+<li class="chapter" data-level="12" data-path="references.html"><a href="references.html"><i class="fa fa-check"></i><b>12</b> References</a></li>
 <li class="divider"></li>
 <li><a href="https://github.com/rstudio/bookdown" target="blank">Published with bookdown</a></li>