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dadi_pipeline
dadi_pipeline PublicAn accessible and flexible tool for fitting demographic models with dadi using custom or published models (available here), conducting goodness of fit tests, and plotting.
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SuperCRUNCH
SuperCRUNCH PublicA bioinformatics package for creating, filtering, and manipulating supermatrices and phylogenetic datasets using GenBank and/or local sequence data.
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TaxonomyAlign
TaxonomyAlign PublicTaxonomy-guided multiple sequence alignment for difficult genes, including 12S and 16S mitochondrial rRNA.
Python 5
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Pandas-for-Population-Structure-Barplots
Pandas-for-Population-Structure-Barplots PublicA jupyter notebook tutorial for making high-quality barplot figures from population structure analyses (Admixture, Structure) with Python & Pandas.
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SSDi-Calculator
SSDi-Calculator PublicA Python tool for calculating sexual size dimorphism indices from body size data. Performs permutation tests to determine statistically significant sexual dimorphism.
Python 3
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