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Refactored concatenating #9

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118 changes: 0 additions & 118 deletions encoder_experiment.py

This file was deleted.

72 changes: 1 addition & 71 deletions experiment.py
Original file line number Diff line number Diff line change
Expand Up @@ -37,7 +37,6 @@
)
from klinker.blockers.hybrid import (
CompositeRelationalDeepBlocker,
CompositeLightEABlocker,
CompositeEmbeddingBlocker,
)
from klinker.blockers.base import Blocker
Expand Down Expand Up @@ -559,12 +558,7 @@ def process_pipeline(
tracker = experiment_info.tracker

start = time.time()
blocks = blocker.assign(
left=klinker_dataset.left,
right=klinker_dataset.right,
left_rel=klinker_dataset.left_rel,
right_rel=klinker_dataset.right_rel,
)
blocks = blocker.assign_from_dataset(klinker_dataset)
blocks.to_parquet(experiment_info.blocks_path, overwrite=True)

end = time.time()
Expand Down Expand Up @@ -1373,65 +1367,6 @@ def composite_relational_deepblocker(
return (blocker, click.get_current_context().params, end - start)


@cli.command
@click.option("--min-token-length", type=int, default=3)
@click.option("--top-n-a", type=int, default=None)
@click.option("--top-n-r", type=int, default=None)
@click.option("--depth", type=int, default=2)
@click.option("--mini-dim", type=int, default=16)
@click.option("--rel-dim", type=int)
@embedding_options
def composite_light_ea_blocker(
min_token_length: int,
top_n_a: Optional[int],
top_n_r: Optional[int],
depth: int,
mini_dim: int,
rel_dim: Optional[int],
inner_encoder: Type[TokenizedFrameEncoder],
embeddings: str,
inner_encoder_batch_size: int,
reduce_dim_to: int,
reduce_sample_perc: float,
block_builder: Type[EmbeddingBlockBuilder],
block_builder_kwargs: str,
n_neighbors: int,
n_candidates: Optional[int],
force: bool,
save_emb: bool,
):
if top_n_a and top_n_a < 0:
top_n_a = None
if top_n_r and top_n_r < 0:
top_n_r = None
inner_encoder_inst = create_inner_encoder(
inner_encoder,
embeddings,
inner_encoder_batch_size,
reduce_dim_to,
reduce_sample_perc,
)
bb_kwargs = parse_bb_kwargs(
block_builder_kwargs, n_neighbors, block_builder, n_candidates
)
print(bb_kwargs)
start = time.time()
blocker = CompositeLightEABlocker(
min_token_length=min_token_length,
top_n_a=top_n_a,
top_n_r=top_n_r,
depth=depth,
mini_dim=mini_dim,
inner_encoder=inner_encoder_inst,
embedding_block_builder=block_builder,
embedding_block_builder_kwargs=bb_kwargs,
force=force,
save=save_emb,
)
end = time.time()
return (blocker, click.get_current_context().params, end - start)


@cli.command()
@click.option("--min-token-length", type=int, default=3)
@click.option("--top-n-a", type=int, default=None)
Expand Down Expand Up @@ -1680,9 +1615,4 @@ def composite_relational_token_clustering_lsh_blocker(


if __name__ == "__main__":
# import dask
# dask.config.set(scheduler='processes')
# from dask.distributed import Client, LocalCluster
# cluster = LocalCluster() # Launches a scheduler and workers locally
# client = Client(cluster) # Connect to distributed cluster and override default
cli()
6 changes: 0 additions & 6 deletions src/klinker/__init__.py
Original file line number Diff line number Diff line change
Expand Up @@ -2,18 +2,12 @@

from .data import (
KlinkerBlockManager,
KlinkerDaskFrame,
KlinkerDataset,
KlinkerFrame,
NNBasedKlinkerBlockManager,
CompositeWithNNBasedKlinkerBlockManager,
)

__all__ = [
"KlinkerFrame",
"KlinkerPandasFrame",
"KlinkerDaskFrame",
"KlinkerPandasTripleFrame",
"KlinkerDataset",
"KlinkerBlockManager",
"NNBasedKlinkerBlockManager",
Expand Down
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