Skip to content

Commit

Permalink
Updated WHAT_IS_NEW
Browse files Browse the repository at this point in the history
  • Loading branch information
Bo Li committed Oct 2, 2016
1 parent 591ea2e commit 3c6b7c4
Showing 1 changed file with 1 addition and 0 deletions.
1 change: 1 addition & 0 deletions WHAT_IS_NEW
Original file line number Diff line number Diff line change
Expand Up @@ -3,6 +3,7 @@ RSEM v1.3.0
- Added Prior-Enhanced RSEM (pRSEM) as a submodule
- Introduced `--strandedness <none|forward|reverse>` option, `--strand-specific` and `--forward-prob` are deprecated (but still supported)
- Revised documentation for `rsem-plot-model`, maked it clear that in alignment statistics, isoform-level (instead of genome-level) multi-mapping reads are shown
- Significantly improved the output information of `rsem-sam-validator`: if indels/clippings/skips are detected in alignments or alignments exceed transcript boundaries, `rsem-sam-validator` will report them instead of telling you the input is valid
- Updated the warning message to ask users to make sure that they align their reads agains a set of transcripts instead of genome when RSEM finds less sequences in the BAM file than RSEM's indices

--------------------------------------------------------------------------------------------
Expand Down

0 comments on commit 3c6b7c4

Please sign in to comment.