dervinism
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mouse-analysis Public
Mouse brain-wide infra-slow neural activity dynamics analysis scripts and functions
MATLAB UpdatedMar 7, 2025 -
fieldtrip Public
Forked from fieldtrip/fieldtripThe MATLAB toolbox for MEG, EEG and iEEG analysis. This has been modified to work with Neuralynx data generated at Mayo Clinic
MATLAB GNU General Public License v3.0 UpdatedFeb 28, 2025 -
mouse-analysis-ibl-bwm Public
Mouse brain-wide infra-slow neural activity dynamics analysis scripts and functions for IBL's Brain Wide Map repository
MATLAB UpdatedFeb 11, 2025 -
tbp.monty Public
Forked from thousandbrainsproject/tbp.montyMonty is a sensorimotor learning framework based on the thousand brains theory of the neocortex.
Python MIT License UpdatedJan 24, 2025 -
dervinis-lab-matlab Public
Matlab code for neuroscience lab functions developed by Martynas Dervinis
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minis Public
'minis' is a software for electrophysiological data analysis. It allows you to detect and analyse spontaneous postsynaptic potetnials/currents in whole-cell patch clamp recordings and to estimate t…
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minis-quantal-analysis Public
Analysis code for the minis quantal analysis study
MATLAB GNU General Public License v3.0 UpdatedDec 6, 2024 -
minis-benchmarking Public
Analysis code for the minis benchmarking study
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Mouse brain-wide infra-slow neural activity dynamics analysis scripts and functions for IBL's Eight Probes repository
MATLAB UpdatedNov 12, 2024 -
syncNeuropixels Public
Matlab functions for synchronising dual Neuropixels recording data
MATLAB GNU General Public License v3.0 UpdatedNov 10, 2024 -
chronux_2_12v03 Public
Modified chronux Matlab package (http://chronux.org/)
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thalamocortical1 Public
Large-scale thalamocortical network model for simulating physiological and paroxysmal brain rhythms: version 1
MATLAB UpdatedOct 13, 2024 -
thalamocortical2 Public
Large-scale thalamocortical network model for simulating physiological and paroxysmal brain rhythms: version 2
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A guide to managing neuroscience data at the University of Bristol
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petersen-lab-matlab Public
Forked from petersen-lab/petersen-lab-matlabMatlab code for the PetersenLab at UCPH
MATLAB UpdatedApr 11, 2024 -
ms-preliminary-code Public
Top level scripts used to analyse medial septum (MS) preliminary recordings. The code is not intended for public use because it is not well documented and relies on many other dependencies. If you …
MATLAB UpdatedApr 9, 2024 -
UnitMatch Public
Forked from EnnyvanBeest/UnitMatchEphys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days. This is code is modified to run on data that is similar to the one in the ms-pre…
MATLAB Other UpdatedMar 27, 2024 -
circStatNP Public
Non-parametric circular statistics functions for Matlab
MATLAB GNU General Public License v3.0 UpdatedFeb 23, 2024 -
sortingPipeline Public
Matlab functions for spike-sorting with kilosort 1 and 2 compatible with both Neuronexus and Neuropixels probes
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geometricLayout Public
Matlab functions for Neuronexus probe mapping and processing binary files with electrophysiological recording data
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lfpProcessingFunctions Public
Matlab functions for processing LFP signal
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CellExplorer Public
Forked from petersenpeter/CellExplorerCellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cells acquired using extracellular electrodes.
MATLAB BSD 3-Clause "New" or "Revised" License UpdatedAug 9, 2023 -
petersen-lab-book Public
Forked from petersen-lab/petersen-lab-bookPetersen Lab Book github site repository
HTML UpdatedJun 7, 2023 -
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convert2nwbIcephysPy Public
Python functions to convert intracellular electrophysiology data to Neurodata Without Borders (NWB) file format.
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convert2nwbIcephysMat Public
Matlab functions to convert intracellular electrophysiology data to Neurodata Without Borders (NWB) file format.
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convert2nwbOphysPy Public
Python functions to convert calcium imaging data and associated intracellular electrophysiology data to Neurodata Without Borders (NWB) file format
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convert2nwbOphysMat Public
Matlab functions to convert calcium imaging data and associated intracellular electrophysiology data to Neurodata Without Borders (NWB) file format