docs: document different software

[njzjz]

Fix #1003.

• MD
  • LAMMPS
  • Amber
  • Calypso
  • Gromacs
• FP
  • VASP
  • Gaussian
  • Siesta
  • CP2k
  • ABACUS
  • Amber DPRc
  • PWmat
  • PWSCF
  • Customized

[njzjz]

Need some help from others for this PR.

[codecov]

Codecov Report

All modified and coverable lines are covered by tests ✅

Comparison is base (c3d8f96) 49.42% compared to head (ad9d989) 49.42%.
Report is 1 commits behind head on devel.

Additional details and impacted files

@@           Coverage Diff           @@
##            devel    #1431   +/-   ##
=======================================
  Coverage   49.42%   49.42%           
=======================================
  Files          83       83           
  Lines       14817    14817           
=======================================
  Hits         7323     7323           
  Misses       7494     7494           

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