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@ayobi
ayobi committed Aug 3, 2023
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154 changes: 123 additions & 31 deletions index.html
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<!doctype html>
<html lang="en">
<head>
<!-- Required meta tags -->
<meta charset="utf-8">
<meta name="viewport" content="width=device-width, initial-scale=1">

<!-- Bootstrap CSS -->
<link href="https://cdn.jsdelivr.net/npm/[email protected]/dist/css/bootstrap.min.css" rel="stylesheet" integrity="sha384-EVSTQN3/azprG1Anm3QDgpJLIm9Nao0Yz1ztcQTwFspd3yD65VohhpuuCOmLASjC" crossorigin="anonymous">
<link rel="stylesheet"
href="//cdnjs.cloudflare.com/ajax/libs/highlight.js/11.6.0/styles/default.min.css">

<title>Lab schemas</title>
</head>
<body>
<nav class="navbar navbar-expand-lg py-2 mb-4 border-bottom navbar-light" aria-label="navbar" style="background-color: #EFF3F6;">
<div class="container">
<a href="https://databio.org" alt="Sheffield lab of computational biology" class="align-items-center mb-3 mb-md-0 me-md-auto text-dark text-decoration-none">
<img src="https://databio.org/images/logo/logo_databio_long.svg" alt="databio" width="240">
</a>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbarSupportedContent" aria-controls="navbarSupportedContent" aria-expanded="false" aria-label="Toggle navigation">
<span class="navbar-toggler-icon"></span>
</button>
<div class="collapse navbar-collapse me-auto" id="navbarSupportedContent">
<ul class="navbar-nav ms-auto mb-2 mb-sm-0">
<li class="nav-item mx-2 my-0 h5"><a href="https://github.com/databio/schema.databio.org" class="nav-link">GitHub Repository</a></li>
</ul>
</div>
<head>
<!-- Required meta tags -->
<meta charset="utf-8">
<meta name="viewport" content="width=device-width, initial-scale=1">

<!-- Bootstrap CSS -->
<link href="https://cdn.jsdelivr.net/npm/[email protected]/dist/css/bootstrap.min.css" rel="stylesheet" integrity="sha384-EVSTQN3/azprG1Anm3QDgpJLIm9Nao0Yz1ztcQTwFspd3yD65VohhpuuCOmLASjC" crossorigin="anonymous">
<link rel="stylesheet"
href="//cdnjs.cloudflare.com/ajax/libs/highlight.js/11.6.0/styles/default.min.css">
<style>
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float: left;
margin-right: 10px;
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margin-top: 20px;
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</style>

<title>Lab schemas</title>
</head>
<body>
<nav class="navbar navbar-expand-lg py-2 mb-4 border-bottom navbar-light" aria-label="navbar" style="background-color: #EFF3F6;">
<div class="container">
<a href="https://databio.org" alt="Sheffield lab of computational biology" class="align-items-center mb-3 mb-md-0 me-md-auto text-dark text-decoration-none">
<img src="https://databio.org/images/logo/logo_databio_long.svg" alt="databio" width="240">
</a>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbarSupportedContent" aria-controls="navbarSupportedContent" aria-expanded="false" aria-label="Toggle navigation">
<span class="navbar-toggler-icon"></span>
</button>
<div class="collapse navbar-collapse me-auto" id="navbarSupportedContent">
<ul class="navbar-nav ms-auto mb-2 mb-sm-0">
<li class="nav-item mx-2 my-0 h5"><a href="https://github.com/databio/schema.databio.org" class="nav-link">GitHub Repository</a></li>
</ul>
</div>
</nav>
<div id="root"></div>
<script type="module" src="/src/main.tsx"></script>
</body>
</html>
</div>
</nav>
<div class="container">
<div class="header">
<h1>Lab schemas</h1>
</div>
<h2>About</h2>

Here you'll find an API for databio lab schemas like bulker, pep, pipelines, refgenie, refget, etc.

<h2>Contributing a schema</h2>

<h4>Write a schema</h4>

First, you have to write a schema yaml file. It should follow json-schema format.

<h4>Upload your schema</h4>

After creating your schema file, you can contribute it to this repository so that you and others can more easily load it. Name your schema yaml file with the name of the schema. Schemas in the registry are divided into namespaces, which are represented as subfolders in this repository. So, place your schema into an appropriate subfolder, and then open a pull request.

<h2>List of schemas (<a href="https://schema.databio.org/list.json">JSON</a>)</h2>
<div id="templateList"></div>

<div style="margin:50px">Brought to you by: <a href="https://databio.org">Sheffield lab of computational biology</a></div>
</div>


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<link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/highlight.js/11.6.0/styles/default.min.css">
<script src="https://cdnjs.cloudflare.com/ajax/libs/highlight.js/11.6.0/highlight.min.js"></script>
<script>
hljs.highlightAll();
getList = async () => {
var tplList = await fetch("https://schema.databio.org/list.json")
.then(response => response.json())
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return tplList
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var tplList;
tplList = getList()
</script>


</body>

</html>
34 changes: 34 additions & 0 deletions index_new.html
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<!doctype html>
<html lang="en">
<head>
<!-- Required meta tags -->
<meta charset="utf-8">
<meta name="viewport" content="width=device-width, initial-scale=1">

<!-- Bootstrap CSS -->
<link href="https://cdn.jsdelivr.net/npm/[email protected]/dist/css/bootstrap.min.css" rel="stylesheet" integrity="sha384-EVSTQN3/azprG1Anm3QDgpJLIm9Nao0Yz1ztcQTwFspd3yD65VohhpuuCOmLASjC" crossorigin="anonymous">
<link rel="stylesheet"
href="//cdnjs.cloudflare.com/ajax/libs/highlight.js/11.6.0/styles/default.min.css">

<title>Lab schemas</title>
</head>
<body>
<nav class="navbar navbar-expand-lg py-2 mb-4 border-bottom navbar-light" aria-label="navbar" style="background-color: #EFF3F6;">
<div class="container">
<a href="https://databio.org" alt="Sheffield lab of computational biology" class="align-items-center mb-3 mb-md-0 me-md-auto text-dark text-decoration-none">
<img src="https://databio.org/images/logo/logo_databio_long.svg" alt="databio" width="240">
</a>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbarSupportedContent" aria-controls="navbarSupportedContent" aria-expanded="false" aria-label="Toggle navigation">
<span class="navbar-toggler-icon"></span>
</button>
<div class="collapse navbar-collapse me-auto" id="navbarSupportedContent">
<ul class="navbar-nav ms-auto mb-2 mb-sm-0">
<li class="nav-item mx-2 my-0 h5"><a href="https://github.com/databio/schema.databio.org" class="nav-link">GitHub Repository</a></li>
</ul>
</div>
</div>
</nav>
<div id="root"></div>
<script type="module" src="/src/main.tsx"></script>
</body>
</html>
126 changes: 0 additions & 126 deletions index_old.html
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