How to visualize multiple cell type in a single figure?

[CyrusWang57]

Hi, thanks to develop this wonderful methods. I just want to know how to produce this type of figure in your article, which shows fractions of multiple cell type. I can't find solution in tutorial and it seems there don't exist this function in the source code?
Look forward to reply! Thanks a lot!

[beibeiru]

Hi, Chunyi,

Thank you for your question. I have revised the visualization function. Please reinstall our package.
As in the following example, you can assign a list to spatialFeatures.
Please let me know if you have any other concerns.

SpaCET.visualize.spatialFeature(
  SpaCET_obj, 
  spatialType = "CellFraction", 
  spatialFeatures=list(Cancer="Malignant",Stromal=c("CAF","Endothelial"),Immune=c("B cell","T CD4","T CD8","NK"))
)

Best,
Beibei

[CyrusWang57]

Thank you very much for your quick update and reply! It worked well and helped me a lot!