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Matrix Computations algorithms, chapter one added.
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Emanuel D R Sena
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Sep 28, 2017
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{ | ||
"cells": [ | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"# Matrix Multiplication" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 26, | ||
"metadata": { | ||
"collapsed": true | ||
}, | ||
"outputs": [], | ||
"source": [ | ||
"import numpy as np" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"## Variables for tests" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"#### Constants for tests" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 37, | ||
"metadata": { | ||
"collapsed": true | ||
}, | ||
"outputs": [], | ||
"source": [ | ||
"c_x = np.random.randn(1, 1)\n", | ||
"c_y = np.random.randn(1, 1)\n", | ||
"c_z = np.random.randn(1, 1)" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"#### Vectors for test" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 39, | ||
"metadata": { | ||
"collapsed": true | ||
}, | ||
"outputs": [], | ||
"source": [ | ||
"v_x = np.random.randn(1000, 1)\n", | ||
"v_y = np.random.randn(1000, 1)\n", | ||
"v_z = np.random.randn(1000, 1)" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"#### Matrices for test" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 40, | ||
"metadata": { | ||
"collapsed": true | ||
}, | ||
"outputs": [], | ||
"source": [ | ||
"m_x = np.random.randn(1000, 1000)\n", | ||
"m_y = np.random.randn(1000, 1000)\n", | ||
"m_z = np.random.randn(1000, 1000)" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"## Algorithm Implementation" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"#### Algorithm 1.1.1: Dot Product" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 51, | ||
"metadata": { | ||
"collapsed": true | ||
}, | ||
"outputs": [], | ||
"source": [ | ||
"def dot_product(x, y):\n", | ||
" c = 0\n", | ||
" \n", | ||
" for i in np.arange(x.size):\n", | ||
" c = c + x[i]*y[i]\n", | ||
" \n", | ||
" return c" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"#### Algorithm 1.1.2: Saxpy" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 52, | ||
"metadata": { | ||
"collapsed": true | ||
}, | ||
"outputs": [], | ||
"source": [ | ||
"def saxpy(a, x, y):\n", | ||
" for i in np.arange(x.size):\n", | ||
" y[i] = y[i] + a*x[i]\n", | ||
" \n", | ||
" return y" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"#### Testing algorithms 1.1.1 and 1.1.2" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 60, | ||
"metadata": {}, | ||
"outputs": [ | ||
{ | ||
"name": "stdout", | ||
"output_type": "stream", | ||
"text": [ | ||
"CPU times: user 0 ns, sys: 0 ns, total: 0 ns\n", | ||
"Wall time: 1.49 ms\n" | ||
] | ||
} | ||
], | ||
"source": [ | ||
"# Test Algorithm 1.1.1 (Dot Product)\n", | ||
"%time temp = dot_product(v_x, v_y)" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 61, | ||
"metadata": {}, | ||
"outputs": [ | ||
{ | ||
"name": "stdout", | ||
"output_type": "stream", | ||
"text": [ | ||
"CPU times: user 4 ms, sys: 0 ns, total: 4 ms\n", | ||
"Wall time: 3.92 ms\n" | ||
] | ||
} | ||
], | ||
"source": [ | ||
"# Test Algorithm 1.1.2 (Saxpy)\n", | ||
"%time temp = saxpy(c_x, v_x, v_y)" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"### Matrix-Vector Multiplication and the Gaxpy" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"#### Algorithm 1.1.3: Row-Oriented Gaxpy" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 55, | ||
"metadata": {}, | ||
"outputs": [], | ||
"source": [ | ||
"def row_gaxpy(A, x, y):\n", | ||
" for i in np.arange(y.size):\n", | ||
" for j in np.arange(x.size):\n", | ||
" y[i] = y[i] + A[i, j]*x[j]\n", | ||
" \n", | ||
" return y" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"#### Algorithm 1.1.4: Column-Oriented Gaxpy" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 56, | ||
"metadata": {}, | ||
"outputs": [], | ||
"source": [ | ||
"def column_gaxpy(A, x, y):\n", | ||
" for j in np.arange(x.size):\n", | ||
" for i in np.arange(y.size):\n", | ||
" y[i] = y[i] + A[i, j]*x[j]\n", | ||
" \n", | ||
" return y" | ||
] | ||
}, | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": { | ||
"collapsed": true | ||
}, | ||
"source": [ | ||
"#### Testing algorithms 1.1.3 and 1.1.4" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 57, | ||
"metadata": {}, | ||
"outputs": [ | ||
{ | ||
"name": "stdout", | ||
"output_type": "stream", | ||
"text": [ | ||
"CPU times: user 1.89 s, sys: 0 ns, total: 1.89 s\n", | ||
"Wall time: 1.89 s\n" | ||
] | ||
} | ||
], | ||
"source": [ | ||
"# Test Row-Oriented Gaxpy\n", | ||
"%time temp = row_gaxpy(m_x, v_x, v_y)" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 59, | ||
"metadata": {}, | ||
"outputs": [ | ||
{ | ||
"name": "stdout", | ||
"output_type": "stream", | ||
"text": [ | ||
"CPU times: user 1.96 s, sys: 24 ms, total: 1.98 s\n", | ||
"Wall time: 1.95 s\n" | ||
] | ||
} | ||
], | ||
"source": [ | ||
"# Test Column-Oriented Gaxpy\n", | ||
"%time temp = column_gaxpy(m_x, v_x, v_y)" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": null, | ||
"metadata": { | ||
"collapsed": true | ||
}, | ||
"outputs": [], | ||
"source": [] | ||
} | ||
], | ||
"metadata": { | ||
"kernelspec": { | ||
"display_name": "Python [default]", | ||
"language": "python", | ||
"name": "python3" | ||
}, | ||
"language_info": { | ||
"codemirror_mode": { | ||
"name": "ipython", | ||
"version": 3 | ||
}, | ||
"file_extension": ".py", | ||
"mimetype": "text/x-python", | ||
"name": "python", | ||
"nbconvert_exporter": "python", | ||
"pygments_lexer": "ipython3", | ||
"version": "3.5.3" | ||
} | ||
}, | ||
"nbformat": 4, | ||
"nbformat_minor": 2 | ||
} |
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