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@dantaslab

The Dantas Lab

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  1. resfams resfams Public

    Antibiotic Resistance annotation by profile Hidden Markov Models

    3

  2. resAnnotator resAnnotator Public

    Python 3

  3. spack-gdlab-repo spack-gdlab-repo Public

    Dantas Lab's custom spack packages

    Python 1 1

  4. preclinAD_GutMicrobiomes preclinAD_GutMicrobiomes Public

    Analyses of stool microbiomes from preclinical Alzheimer disease cohorts

    R 1

  5. DOME DOME Public

    R 1

  6. parfums parfums Public

    Perl 2

Repositories

Showing 10 of 19 repositories
  • 2024_Blake_TET-resistome Public

    Data, code, and analyses for Blake (2024). Nature Communications.

    dantaslab/2024_Blake_TET-resistome’s past year of commit activity
    HTML 0 0 0 0 Updated Dec 20, 2024
  • 2024_Fishbein_DeVeaux_Khanna_Cdiff_DefCom_Microbiome Public

    Commensal-pathogen dynamics structure disease outcomes during Clostridioides difficile colonization

    dantaslab/2024_Fishbein_DeVeaux_Khanna_Cdiff_DefCom_Microbiome’s past year of commit activity
    R 0 0 0 0 Updated Dec 15, 2024
  • 2024_Sb_Probiotics_CancerMicrobiome Public

    R Script to analyze and visualize 16S amplicon data included in Gorushi, Wallace, and Prusa 2024

    dantaslab/2024_Sb_Probiotics_CancerMicrobiome’s past year of commit activity
    R 0 0 0 0 Updated Oct 14, 2024
  • spack-gdlab-repo Public

    Dantas Lab's custom spack packages

    dantaslab/spack-gdlab-repo’s past year of commit activity
    Python 1 Apache-2.0 1 0 0 Updated Aug 29, 2024
  • deconseq-multi Public

    Modified Deconseq to utilize multiple threads

    dantaslab/deconseq-multi’s past year of commit activity
    C 0 GPL-3.0 0 0 0 Updated Aug 29, 2024
  • ICUSink Public

    Scripts used for analysis in the ICU Sink project.

    dantaslab/ICUSink’s past year of commit activity
    Python 0 0 0 0 Updated Aug 4, 2024
  • NICUExposome Public

    Scripts for NICU Exposome manuscript

    dantaslab/NICUExposome’s past year of commit activity
    R 0 0 0 0 Updated Jul 13, 2024
  • .github Public
    dantaslab/.github’s past year of commit activity
    0 0 0 0 Updated Jul 8, 2024
  • spack Public Forked from spack/spack

    A flexible package manager that supports multiple versions, configurations, platforms, and compilers.

    dantaslab/spack’s past year of commit activity
    Python 0 2,348 0 0 Updated Jun 29, 2024
  • 2023_Blake_TDase-HMM-mut Public archive

    Data, code, and analyses for Blake et al. (2023). Commun Biol.

    dantaslab/2023_Blake_TDase-HMM-mut’s past year of commit activity
    Shell 0 1 0 0 Updated Feb 8, 2024
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