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Use "cache_spec:False" in our copy_nwb_file helper while exporting NWB copy #1497

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merged 3 commits into from
Sep 27, 2024
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Use "cache_spec:False" in our copy_nwb_file helper while exporting NWB copy #1497

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ca7ddad
Use "cache_spec:False" in our copy_nwb_file helper while exporting NW…
yarikoptic Sep 9, 2024
4061912
Use released version of pynwb in comparison
yarikoptic Sep 13, 2024
8dba010
Fix comparison but also make caching optional depending on either ori…
yarikoptic Sep 13, 2024
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11 changes: 10 additions & 1 deletion dandi/pynwb_utils.py
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Original file line number Diff line number Diff line change
Expand Up @@ -518,7 +518,16 @@ def copy_nwb_file(src: str | Path, dest: str | Path) -> str:
with pynwb.NWBHDF5IO(src, "r") as ior, pynwb.NWBHDF5IO(dest, "w") as iow:
data = ior.read()
data.generate_new_id()
iow.export(ior, nwbfile=data)
iow.export(
ior,
nwbfile=data,
# do not export spec since
**(
{"cache_spec": False}
if Version(pynwb.__version__) > Version("2.8.2.dev11")
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else {}
),
)
return str(dest)


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