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Update README.md #155

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merged 5 commits into from
Aug 13, 2024
Merged

Update README.md #155

merged 5 commits into from
Aug 13, 2024

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ieivanov
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@ieivanov ieivanov commented Aug 8, 2024

Update readme to clarify mantis / shrimpy naming and document additional CLIs

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@talonchandler talonchandler left a comment

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LGTM!

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@mattersoflight mattersoflight left a comment

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The change looks good to me, the paper is online at https://academic.oup.com/pnasnexus/advance-article/doi/10.1093/pnasnexus/pgae323/

README.md Outdated
@@ -1,21 +1,23 @@
# shrimPy: Smart High-throughput Robust Imaging & Measurement in Python
![acquisition and reconstruction schematic](docs/figure_3a.png)

shrimPy (pronounced: ʃrɪm-pai) is a pythonic framework for high-throughput smart microscopy and high-performance analysis. The current alpha version of the framework is specific to the mantis microscope, described in our [preprint](https://www.biorxiv.org/content/10.1101/2023.12.19.572435v1), but extensible to a high throughput microscope that is controlled with [Micro-Manager](https://micro-manager.org/).
shrimPy (pronounced: ʃrɪm-pai) is a pythonic framework for high-throughput smart microscopy and high-performance analysis. The current alpha version of the framework is specific to the mantis microscope, described in our [manuscript](https://www.biorxiv.org/content/10.1101/2023.12.19.572435v1), but extensible to a high throughput microscope that is controlled with [Micro-Manager](https://micro-manager.org/).
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@ieivanov ieivanov merged commit 8f2469b into main Aug 13, 2024
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@ieivanov ieivanov deleted the update_readme branch August 13, 2024 15:49
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3 participants