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Parser #136

Merged
merged 54 commits into from
Sep 12, 2023
Merged

Parser #136

merged 54 commits into from
Sep 12, 2023

Commits on Mar 23, 2023

  1. initial steps towards implementing a pollen parser

    Susan Garry authored and Susan Garry committed Mar 23, 2023
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Commits on Mar 25, 2023

  1. we can parse things now! But not backspace characters.

    Susan Garry authored and Susan Garry committed Mar 25, 2023
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  2. backspace characters parse

    Susan Garry authored and Susan Garry committed Mar 25, 2023
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Commits on Apr 6, 2023

  1. Parser can handle binop expressions

    Susan Garry authored and Susan Garry committed Apr 6, 2023
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Commits on Apr 10, 2023

  1. Delete .DS_Store

    @susan-garry
    susan-garry authored Apr 10, 2023
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  2. Delete .DS_Store

    @susan-garry
    susan-garry authored Apr 10, 2023
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  3. Delete libast.rlib

    @susan-garry
    susan-garry authored Apr 10, 2023
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  4. Delete libmod.rlib

    @susan-garry
    susan-garry authored Apr 10, 2023
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  5. Delete CACHEDIR.TAG

    @susan-garry
    susan-garry authored Apr 10, 2023
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  6. Delete pollen/target directory

    @susan-garry
    susan-garry authored Apr 10, 2023
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  7. Update .gitignore

    Susan Garry authored and Susan Garry committed Apr 10, 2023
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  8. Small snafu in turnt -- needed to normalize flip's oracle output

    @anshumanmohan
    anshumanmohan authored and Susan Garry committed Apr 10, 2023
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  9. fix snafu introduced when fixing snafu. ugh

    @anshumanmohan
    anshumanmohan authored and Susan Garry committed Apr 10, 2023
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  10. Testing infra for flatten

    @anshumanmohan
    anshumanmohan authored and Susan Garry committed Apr 10, 2023
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  11. flatten: fasta done

    @anshumanmohan
    anshumanmohan authored and Susan Garry committed Apr 10, 2023
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  12. Progress in flatten. Some bugs lurking.

    @anshumanmohan
    anshumanmohan authored and Susan Garry committed Apr 10, 2023
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  13. Done with flatten

    @anshumanmohan
    anshumanmohan authored and Susan Garry committed Apr 10, 2023
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  14. testing infra for inject

    @anshumanmohan
    anshumanmohan authored and Susan Garry committed Apr 10, 2023
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  15. Update slow_odgi/flatten.py 

    Co-authored-by: Adrian Sampson <[email protected]>
    @anshumanmohan @sampsyo
    2 people authored and Susan Garry committed Apr 10, 2023
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  16. Update slow_odgi/flatten.py 

    Co-authored-by: Adrian Sampson <[email protected]>
    @anshumanmohan @sampsyo
    2 people authored and Susan Garry committed Apr 10, 2023
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  17. Use dataclass's built in sort ordering

    @sampsyo
    sampsyo authored and Susan Garry committed Apr 10, 2023
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  18. Testing infrastructure for overlap

    @anshumanmohan
    anshumanmohan authored and Susan Garry committed Apr 10, 2023
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  19. sync up slow-odgi files with main branch

    Susan Garry authored and Susan Garry committed Apr 10, 2023
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  20. Merge branch 'main' into parser

    @susan-garry
    susan-garry authored Apr 10, 2023
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  21. minor tweak in Makefile

    @anshumanmohan
    anshumanmohan authored and Susan Garry committed Apr 10, 2023
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Commits on Apr 11, 2023

  1. types go after variable identifiers

    @susan-garry
    susan-garry committed Apr 11, 2023
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Commits on Apr 13, 2023

  1. Merge branch 'main' of https://github.com/cucapra/pollen into parser

    @susan-garry
    susan-garry committed Apr 13, 2023
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  2. add slow-odgi generated files to .gitignore

    @susan-garry
    susan-garry committed Apr 13, 2023
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  3. clean up .gitignore

    @susan-garry
    susan-garry committed Apr 13, 2023
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  4. fix .gitignore, Makefile

    @susan-garry
    susan-garry committed Apr 13, 2023
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Commits on Apr 14, 2023

  1. add support for record field access

    @susan-garry
    susan-garry committed Apr 14, 2023
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  2. add support for block statements

    @susan-garry
    susan-garry committed Apr 14, 2023
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  3. if/elif/else statements are supportedgit status

    @susan-garry
    susan-garry committed Apr 14, 2023
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  4. while loops parse

    @susan-garry
    susan-garry committed Apr 14, 2023
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  5. for loops parse

    @susan-garry
    susan-garry committed Apr 14, 2023
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  6. pollen can parse record initializations

    @susan-garry
    susan-garry committed Apr 14, 2023
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Commits on Apr 19, 2023

  1. rename record literals for clarity

    @susan-garry
    susan-garry committed Apr 19, 2023
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  2. add support for parsing set types of the form Set<t>

    @susan-garry
    susan-garry committed Apr 19, 2023
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  3. Change Node type to Segment type

    @susan-garry
    susan-garry committed Apr 19, 2023
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  4. comment out tuple types, which don't parse yet

    @susan-garry
    susan-garry committed Apr 19, 2023
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Commits on Apr 21, 2023

  1. emit-to statements parse

    @susan-garry
    susan-garry committed Apr 21, 2023
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  2. pollen parses object initialization expressions like "Strand()". "int… 

    …()" is also syntactically valid
    @susan-garry
    susan-garry committed Apr 21, 2023
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Commits on Apr 27, 2023

  1. function and method calls parse, but only as expressions (i.e. 'fun()… 

    …;' is not valid yet)
    @susan-garry
    susan-garry committed Apr 27, 2023
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Commits on Jun 9, 2023

  1. fix typo

    @susan-garry
    susan-garry committed Jun 9, 2023
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Commits on Jun 21, 2023

  1. Parse call statements, parset declarations, graph declarations

    @susan-garry
    susan-garry committed Jun 21, 2023
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  2. Introduce functions. Pollen programs consist of a list of functions; … 

    …nested functions are not supported.
    @susan-garry
    susan-garry committed Jun 21, 2023
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Commits on Jul 5, 2023

  1. import statements parse

    @susan-garry
    susan-garry committed Jul 5, 2023
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Commits on Jul 6, 2023

  1. pollen parses tuples, start testing pollen programs

    @susan-garry
    susan-garry committed Jul 6, 2023
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Commits on Jul 13, 2023

  1. add test for node depth

    @susan-garry
    susan-garry committed Jul 13, 2023
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Commits on Aug 28, 2023

  1. remove incomprehensible comment

    @susan-garry
    susan-garry committed Aug 28, 2023
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  2. import statements ACTUALLY parse, update Cargo.lock

    @susan-garry
    susan-garry committed Aug 28, 2023
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  3. import statements ACTUALLY parse, update Cargo.lock

    @susan-garry
    susan-garry committed Aug 28, 2023
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Commits on Sep 11, 2023

  1. merge parser changes into main branch

    @susan-garry
    susan-garry committed Sep 11, 2023
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  2. rename 'test' directories to 'tests' directories, in keeping with the… 

    … calyx repo
    @susan-garry
    susan-garry committed Sep 11, 2023
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