Merge branch 'release/1.3.2'

DESCRIPTION

@@ -1,7 +1,7 @@
 Package: redcapcustodian
 Type: Package
 Title: System data cleaning for REDCap
-Version: 1.3.1
+Version: 1.3.2
 Authors@R: c(
   person("Philip", "Chase",
         email = "[email protected]",

NEWS.md

@@ -3,6 +3,12 @@ All notable changes to the redcapcustodian package and its contained scripts wil
 This project adheres to [Semantic Versioning](http://semver.org/).
 
 
+## [1.3.2] - 2022-09-14
+### Changed
+- Specify package for na.exclude() (Philip Chase)
+- escape . to treat as literal character instead of wildcard in gsub statements (Kyle Chesney)
+
+
 ## [1.3.1] - 2022-08-30
 ### Added
 - Remove remants of the site concept (Philip Chase)

R/dataset_diff.R

@@ -48,7 +48,7 @@ dataset_diff <- function(source,
     dplyr::anti_join(target) %>%
     dplyr::inner_join(target, by=source_pk) %>%
     dplyr::select(dplyr::any_of(target_pk), dplyr::any_of(names(source)), dplyr::ends_with(".x")) %>%
-    dplyr::rename_with(., ~ gsub(".x", "", .x), dplyr::ends_with(".x"))
+    dplyr::rename_with(., ~ gsub("\\.x", "", .x), dplyr::ends_with(".x"))
 
   ids_of_update_records <- update_records %>% dplyr::pull({{target_pk}})
 

R/read_email.R

@@ -47,7 +47,7 @@ get_bad_emails_from_individual_emails <- function(username,
       mRpostman::sent_since(date_char = format(messages_since_date, format = "%d-%b-%Y"))
     )
   ) %>%
-    na.exclude()
+    stats::na.exclude()
 
   patterns <- c(
     "Original-Recipient: rfc822;.*",

R/write_data.R

@@ -228,7 +228,7 @@ sync_table_2 <- function(
     dplyr::anti_join(target) %>%
     dplyr::inner_join(target, by=source_pk) %>%
     dplyr::select(dplyr::any_of(target_pk), dplyr::any_of(names(source)), dplyr::ends_with(".x")) %>%
-    dplyr::rename_with(., ~ gsub(".x", "", .x), dplyr::ends_with(".x"))
+    dplyr::rename_with(., ~ gsub("\\.x", "", .x), dplyr::ends_with(".x"))
 
   ids_of_update_records <- update_records %>% dplyr::pull({{target_pk}})
 

VERSION

@@ -1 +1 @@
-1.3.1
+1.3.2