version -> 0.12.4

- fix nevermore_align import in main.nf - fix gffquant default gq_aligner
cschu · Apr 19, 2024 · 6610da1 · 6610da1
1 parent e75e55d
commit 6610da1
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Showing 4 changed files with 4 additions and 3 deletions.
diff --git a/main.nf b/main.nf
@@ -3,6 +3,7 @@
 nextflow.enable.dsl=2
 
 include { nevermore_main } from "./nevermore/workflows/nevermore"
+include { nevermore_align } from "./nevermore/workflows/align"
 include { gffquant_flow } from "./nevermore/workflows/gffquant"
 include { fastq_input } from "./nevermore/workflows/input"
 include { collate_stats } from "./nevermore/modules/collate"

diff --git a/nevermore/modules/profilers/gffquant.nf b/nevermore/modules/profilers/gffquant.nf
@@ -1,4 +1,4 @@
-params.gq_aligner = "bwa_mem"
+params.gq_aligner = "bwa"
 
 process stream_gffquant {
 	label "gffquant"

diff --git a/nevermore/version.json b/nevermore/version.json
@@ -1,3 +1,3 @@
 {
-	"version": "0.12.3"
+	"version": "0.12.4"
 }
diff --git a/nextflow.config b/nextflow.config
@@ -4,5 +4,5 @@ manifest {
 	description = "Metaomics pipeline toolbox"
 	name = "nevermore"
 	nextflowVersion = ">=22.10.6"
-	version = "0.12.3"
+	version = "0.12.4"
 }