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reword to: write into the file
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Fortelny Nikolaus authored and Fortelny Nikolaus committed Sep 4, 2024
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2 changes: 1 addition & 1 deletion bash.qmd
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Expand Up @@ -650,7 +650,7 @@ gunzip -c GRCh38_reformatted.gz | grep "seq:[ACTG]*TTAAGACA" | sed 's/^.*gene_sy

Create the following files in the directory `day3`:

- Extract all entries with sequences matching the guide "GCGGTTTC" in the file `guideMatch_GCGGTTTC.txt`.
- Write all entries with sequences matching the guide "GCGGTTTC" into the file `guideMatch_GCGGTTTC.txt`.
- Write the count of entries with sequences starting with "TGC" into the file `count_TGC.txt`.
- Write the count of entries of gene "MMP2" into the file `count_MMP2.txt`. Note: Do not count genes MMP20, MMP21,...
- Write the count of unique genes whose symbol starts with "RPL" into the file `count_RPL.txt`.
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