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dlt: Hello, World! #875
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name: dlt | ||
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on: | ||
pull_request: | ||
paths: | ||
- '.github/workflows/framework-dlt.yml' | ||
- 'framework/dlt/**' | ||
- '/requirements.txt' | ||
push: | ||
branches: [ main ] | ||
paths: | ||
- '.github/workflows/framework-dlt.yml' | ||
- 'framework/dlt/**' | ||
- '/requirements.txt' | ||
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# Allow job to be triggered manually. | ||
workflow_dispatch: | ||
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# Run job each night after CrateDB nightly has been published. | ||
schedule: | ||
- cron: '0 3 * * *' | ||
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# Cancel in-progress jobs when pushing to the same branch. | ||
concurrency: | ||
cancel-in-progress: true | ||
group: ${{ github.workflow }}-${{ github.ref_name }} | ||
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jobs: | ||
test: | ||
name: " | ||
Python: ${{ matrix.python-version }} | ||
CrateDB: ${{ matrix.cratedb-version }} | ||
on ${{ matrix.os }}" | ||
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runs-on: ${{ matrix.os }} | ||
strategy: | ||
fail-fast: false | ||
matrix: | ||
os: [ 'ubuntu-latest' ] | ||
python-version: [ '3.9', '3.13' ] | ||
cratedb-version: [ 'nightly' ] | ||
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services: | ||
cratedb: | ||
image: crate/crate:${{ matrix.cratedb-version }} | ||
ports: | ||
- 4200:4200 | ||
- 5432:5432 | ||
env: | ||
CRATE_HEAP_SIZE: 4g | ||
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steps: | ||
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- name: Acquire sources | ||
uses: actions/checkout@v4 | ||
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- name: Set up Python | ||
uses: actions/setup-python@v5 | ||
with: | ||
python-version: ${{ matrix.python-version }} | ||
architecture: x64 | ||
cache: 'pip' | ||
cache-dependency-path: | | ||
requirements.txt | ||
framework/dlt/requirements.txt | ||
framework/dlt/requirements-dev.txt | ||
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- name: Install utilities | ||
run: | | ||
pip install -r requirements.txt | ||
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- name: Validate framework/dlt | ||
run: | | ||
ngr test --accept-no-venv framework/dlt |
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# Put your main configuration values here. | ||
#add_dlt_id = false | ||
#add_dlt_load_id = false | ||
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[runtime] | ||
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# The system log level of dlt. | ||
log_level="DEBUG" | ||
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# Use the `dlthub_telemetry` setting to enable/disable anonymous | ||
# usage data reporting, see https://dlthub.com/docs/reference/telemetry. | ||
dlthub_telemetry = false |
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[destination.cratedb.credentials] | ||
# CrateDB PostgreSQL interface | ||
host = "localhost" | ||
port = 5432 | ||
username = "crate" | ||
password = "" | ||
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[destination.sqlalchemy.credentials] | ||
# CrateDB HTTP interface | ||
# https://dlthub.com/docs/dlt-ecosystem/destinations/sqlalchemy | ||
drivername = "crate" | ||
host = "localhost" | ||
port = 4200 | ||
database = "" | ||
username = "crate" | ||
password = "" | ||
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[sources.sql_database.credentials] | ||
# CrateDB HTTP interface | ||
# https://dlthub.com/docs/dlt-ecosystem/verified-sources/sql_database/setup | ||
drivername = "crate" | ||
host = "localhost" | ||
port = 4200 | ||
database = "" | ||
username = "crate" | ||
password = "" |
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# ignore secrets, virtual environments and typical python compilation artifacts | ||
# remark: Add it in this case, in order to provide out-of-the-box settings for localhost | ||
# secrets.toml | ||
# ignore basic python artifacts | ||
.env | ||
**/__pycache__/ | ||
**/*.py[cod] | ||
**/*$py.class | ||
# ignore duckdb | ||
*.duckdb | ||
*.wal |
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# dlt with CrateDB example | ||
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## About | ||
Demonstrate connectivity from dlt to CrateDB. | ||
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## Configuration | ||
Configure database connection address and credentials in `.dlt/secrets.toml`. | ||
Please make sure to use valid credentials matching your environment. | ||
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For [CrateDB] on localhost, a default configuration snippet looks like this. | ||
```toml | ||
[destination.cratedb.credentials] | ||
host = "localhost" # CrateDB server host. | ||
port = 5432 # CrateDB PostgreSQL TCP protocol port, default is 5432. | ||
username = "crate" # CrateDB username, default is usually "crate". | ||
password = "" # CrateDB password, if any. | ||
``` | ||
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For [CrateDB Cloud], a configuration snippet looks like this. | ||
```toml | ||
[destination.cratedb.credentials] | ||
host = "<CLUSTERNAME>.eks1.eu-west-1.aws.cratedb.net" # CrateDB server host. | ||
port = 5432 # CrateDB PostgreSQL TCP protocol port, default is 5432. | ||
username = "admin" # CrateDB username, default is usually "admin". | ||
password = "<PASSWORD>" # CrateDB password, if any. | ||
``` | ||
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## Usage | ||
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Install dependencies. | ||
```shell | ||
pip install -r requirements.txt | ||
``` | ||
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Invoke two example pipelines. | ||
```shell | ||
python basic.py | ||
python pokemon.py | ||
``` | ||
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## Appendix | ||
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### CrateDB on localhost | ||
Start a CrateDB instance on your machine. | ||
```shell | ||
docker run -it --rm \ | ||
--publish=4200:4200 --publish=5432:5432 \ | ||
--env=CRATE_HEAP_SIZE=2g \ | ||
crate:latest -Cdiscovery.type=single-node | ||
``` | ||
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### Sandbox | ||
Acquire `cratedb-example` repository, and set up a development sandbox. | ||
```shell | ||
git clone https://github.com/crate/cratedb-examples | ||
cd cratedb-examples | ||
python3 -m venv .venv | ||
source .venv/bin/activate | ||
pip install -r requirements.txt | ||
``` | ||
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### Software tests | ||
Invoke the integration test cases. | ||
```shell | ||
ngr test framework/dlt | ||
``` | ||
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[CrateDB]: https://github.com/crate/crate | ||
[CrateDB Cloud]: https://console.cratedb.cloud/ |
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"""The Intro Pipeline Template contains the example from the docs intro page""" | ||
import os | ||
from typing import Optional | ||
import pandas as pd | ||
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import sqlalchemy as sa | ||
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import dlt | ||
from dlt.sources.helpers import requests | ||
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CRATEDB_ADDRESS = os.getenv("CRATEDB_ADDRESS", "postgresql://crate:@localhost:5432/") | ||
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def load_api_data() -> None: | ||
"""Load data from the chess api, for more complex examples use our rest_api source""" | ||
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# Create a dlt pipeline that will load | ||
# chess player data to the CrateDB destination | ||
pipeline = dlt.pipeline( | ||
pipeline_name="from_api", | ||
destination=dlt.destinations.cratedb(CRATEDB_ADDRESS), | ||
dataset_name="doc", | ||
) | ||
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# Grab some player data from Chess.com API | ||
data = [] | ||
for player in ["magnuscarlsen", "rpragchess"]: | ||
response = requests.get(f"https://api.chess.com/pub/player/{player}", timeout=30) | ||
response.raise_for_status() | ||
data.append(response.json()) | ||
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# Extract, normalize, and load the data | ||
load_info = pipeline.run( | ||
data=data, | ||
table_name="chess_players", | ||
) | ||
print(load_info) # noqa: T201 | ||
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def load_pandas_data() -> None: | ||
"""Load data from a public csv via pandas""" | ||
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owid_disasters_csv = ( | ||
"https://raw.githubusercontent.com/owid/owid-datasets/master/datasets/" | ||
"Natural%20disasters%20from%201900%20to%202019%20-%20EMDAT%20(2020)/" | ||
"Natural%20disasters%20from%201900%20to%202019%20-%20EMDAT%20(2020).csv" | ||
) | ||
df = pd.read_csv(owid_disasters_csv) | ||
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pipeline = dlt.pipeline( | ||
pipeline_name="from_csv", | ||
destination=dlt.destinations.cratedb(CRATEDB_ADDRESS), | ||
dataset_name="doc", | ||
) | ||
load_info = pipeline.run( | ||
data=df, | ||
table_name="natural_disasters", | ||
) | ||
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print(load_info) # noqa: T201 | ||
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def load_sql_data() -> None: | ||
"""Load data from a sql database with sqlalchemy, for more complex examples use our sql_database source""" | ||
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# Use any SQL database supported by SQLAlchemy, below we use a public | ||
# MySQL instance to get data. | ||
# NOTE: you'll need to install pymysql with `pip install pymysql` | ||
# NOTE: loading data from public mysql instance may take several seconds | ||
# NOTE: this relies on external public database availability | ||
engine = sa.create_engine( | ||
"mysql+pymysql://[email protected]:4497/Rfam" | ||
) | ||
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with engine.connect() as conn: | ||
# Select genome table, stream data in batches of 100 elements | ||
query = "SELECT * FROM genome LIMIT 1000" | ||
rows = conn.execution_options(yield_per=100).exec_driver_sql(query) | ||
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pipeline = dlt.pipeline( | ||
pipeline_name="from_database", | ||
destination=dlt.destinations.cratedb(CRATEDB_ADDRESS), | ||
dataset_name="doc", | ||
) | ||
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# Convert the rows into dictionaries on the fly with a map function | ||
load_info = pipeline.run( | ||
data=(dict(row._mapping) for row in rows), | ||
table_name="genome", | ||
) | ||
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print(load_info) # noqa: T201 | ||
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@dlt.resource(write_disposition="replace") | ||
def github_api_resource(api_secret_key: Optional[str] = dlt.secrets.value): | ||
from dlt.sources.helpers.rest_client import paginate | ||
from dlt.sources.helpers.rest_client.auth import BearerTokenAuth | ||
from dlt.sources.helpers.rest_client.paginators import HeaderLinkPaginator | ||
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url = "https://api.github.com/repos/dlt-hub/dlt/issues" | ||
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# Github allows both authenticated and non-authenticated requests (with low rate limits) | ||
auth = BearerTokenAuth(api_secret_key) if api_secret_key else None | ||
for page in paginate( | ||
url, | ||
auth=auth, | ||
paginator=HeaderLinkPaginator(), | ||
params={"state": "open", "per_page": "100"}, | ||
): | ||
yield page | ||
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@dlt.source | ||
def github_api_source(api_secret_key: Optional[str] = dlt.secrets.value): | ||
return github_api_resource(api_secret_key=api_secret_key) | ||
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def load_github_data() -> None: | ||
"""Load GitHub issues data using the github_api_source.""" | ||
pipeline = dlt.pipeline( | ||
pipeline_name="github_api_pipeline", | ||
destination=dlt.destinations.cratedb(CRATEDB_ADDRESS), | ||
dataset_name="doc", | ||
) | ||
load_info = pipeline.run( | ||
data=github_api_source(), | ||
table_name="github_api_data", | ||
) | ||
print(load_info) # noqa: T201 | ||
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def main(): | ||
functions = [ | ||
load_api_data, | ||
load_pandas_data, | ||
load_sql_data, | ||
load_github_data, | ||
] | ||
for func in functions: | ||
try: | ||
func() | ||
except Exception as e: | ||
print(f"Error in {func.__name__}: {e}") # noqa: T201 | ||
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if __name__ == "__main__": | ||
main() |
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