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cpayal authored Feb 4, 2024
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# Computer Aided Drug Design (CADD) Tool Hub
## By : [Payal Chatterjee](https://www.linkedin.com/in/payal-chatterjee-47026628/)
### [Github](https://github.com/cpayal)
### [Google Scholar](https://scholar.google.com/citations?user=I_8EyjcAAAAJ&hl=en)

Welcome to this comprehensive hub of tools and resources for Computational Chemistry, with a special emphasis on drug design. This repository serves as a one-stop destination for computational chemists, researchers, and students seeking Python-based tools and molecular dynamics techniques.

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Below is a summary of the key tools and resources available in this hub:

- **Molecular Dynamics Simulations**:
- Tools and scripts for running MD simulations using major MD packages such as GROMACS,OpenMM and NAMD.
- Tools and fully automated scripts for running MD simulations using major MD packages such as GROMACS,OpenMM and NAMD.
- Tutorials and guides for setting up and analyzing simulations.

- **Drug Design Techniques**:
- Python-based scripts for ligand docking, virtual screening, and pharmacophore modeling.
- Python-based scripts for ligand docking, virtual screening, pharmacophore modeling, QSAR and Machine Learning models in various stages of drug design such as :
- Hit to lead screening
- Lead optimization
- ADMET or DMPK prediction
- Resources on structure-based and ligand-based drug design.

- **Cheminformatics**:
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