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Update load_data_observational.cypher
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Corrected spelling mistake in relationship IS_RESPONSIBLE
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KirstenLangendorf authored Oct 8, 2020
1 parent 233ea69 commit c7aff4d
Showing 1 changed file with 42 additions and 43 deletions.
85 changes: 42 additions & 43 deletions dataloader/load_data_observational.cypher
Original file line number Diff line number Diff line change
Expand Up @@ -23,7 +23,7 @@ with si, study_metadata
UNWIND study_metadata.Acronym as Acronym
set si.acronym=Acronym
;
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
with value.StudyFieldsResponse.NStudiesFound as NStudies, RANGE(0,(value.StudyFieldsResponse.NStudiesFound/1000)) as nloop
UNWIND nloop as i
with range(1+1000*i,1000+1000*i,999) as RANGES
Expand All @@ -48,7 +48,7 @@ UNWIND study_metadata.WhyStopped as WhyStopped
MERGE(ct)-[:WAS_STOPPED]->(r:StopReason{reason:WhyStopped})
MERGE(s)-[:HAS_REASON]->(r)
;
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
with value.StudyFieldsResponse.NStudiesFound as NStudies, RANGE(0,(value.StudyFieldsResponse.NStudiesFound/1000)) as nloop
UNWIND nloop as i
with range(1+1000*i,1000+1000*i,999) as RANGES
Expand All @@ -61,22 +61,23 @@ with r, study_metadata
UNWIND study_metadata.NCTId as Id
match(ct:ClinicalTrial{NCTId:Id})
UNWIND study_metadata.LeadSponsorName as LeadSponsorName
MERGE(ct)-[:IS_SPONSORED_BY]->(k:Sponsor{name:LeadSponsorName})
MERGE(k:Sponsor{name:LeadSponsorName})
FOREACH(ignoreMe IN CASE WHEN r.type='Sponsor' THEN [1] ELSE [] END |
MERGE(r)-[:IS_RESPOSIBLE]->(k))
MERGE(r)-[:IS_RESPONSIBLE]->(k)
MERGE(ct)-[:IS_SPONSORED_BY]->(k))
with ct, k, r, study_metadata
UNWIND study_metadata.ResponsiblePartyInvestigatorFullName as InvestigatorFullName
UNWIND study_metadata.ResponsiblePartyInvestigatorAffiliation as InvestigatorAffiliation
MERGE(i:Investigator{name:InvestigatorFullName, affiliation:InvestigatorAffiliation})
MERGE(ct)-[:IS_CONDUCTED_BY]->(i)
with ct, r, i,k,study_metadata
FOREACH(ignoreMe IN CASE WHEN r.type='Principal Investigator' THEN [1] ELSE [] END |
MERGE(r)-[:IS_RESPOSIBLE]->(i))
MERGE(r)-[:IS_RESPONSIBLE]->(i))
FOREACH(ignoreMe IN CASE WHEN r.type='Sponsor-Investigator' THEN [1] ELSE [] END |
MERGE(r)-[:IS_RESPOSIBLE]->(k)
MERGE(r)-[:IS_RESPOSIBLE]->(i))
MERGE(r)-[:IS_RESPONSIBLE]->(k)
MERGE(r)-[:IS_RESPONSIBLE]->(i))
;
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
with value.StudyFieldsResponse.NStudiesFound as NStudies, RANGE(0,(value.StudyFieldsResponse.NStudiesFound/1000)) as nloop
UNWIND nloop as i
with range(1+1000*i,1000+1000*i,999) as RANGES
Expand All @@ -89,11 +90,11 @@ UNWIND study_metadata.CollaboratorName as CollaboratorName
MERGE(sp:Collaborator{name:CollaboratorName})
MERGE(ct)-[:IS_SUPPORTED_BY]->(sp)
;
MERGE(r:Response{YN:'Yes'})
MERGE(r:Response{YN:'Yes'})
;
MERGE(k:Response{YN:'No'})
MERGE(k:Response{YN:'No'})
;
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
with value.StudyFieldsResponse.NStudiesFound as NStudies, RANGE(0,(value.StudyFieldsResponse.NStudiesFound/1000)) as nloop
UNWIND nloop as i
with range(1+1000*i,1000+1000*i,999) as RANGES
Expand All @@ -112,7 +113,7 @@ UNWIND study_metadata.IsUnapprovedDevice as IsUnapprovedDevice
FOREACH(ignoreMe IN CASE WHEN IsUnapprovedDevice='No' THEN [1] ELSE [] END |
MERGE(ct)-[:IS_FDA_REGULATED_DEVICE]->(r))
;
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
with value.StudyFieldsResponse.NStudiesFound as NStudies, RANGE(0,(value.StudyFieldsResponse.NStudiesFound/1000)) as nloop
UNWIND nloop as i
with range(1+1000*i,1000+1000*i,999) as RANGES
Expand All @@ -131,7 +132,7 @@ match(ct:ClinicalTrial{NCTId:Id}),(r:Response{YN:'No'})
FOREACH(ignoreMe IN CASE WHEN IsFDARegulatedDrug='No' THEN [1] ELSE [] END |
MERGE(ct)-[:IS_FDA_REGULATED_DRUG]->(r))
;
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
with value.StudyFieldsResponse.NStudiesFound as NStudies, RANGE(0,(value.StudyFieldsResponse.NStudiesFound/1000)) as nloop
UNWIND nloop as i
with range(1+1000*i,1000+1000*i,999) as RANGES
Expand All @@ -150,7 +151,7 @@ UNWIND study_metadata.IsFDARegulatedDevice as IsFDARegulatedDevice
FOREACH(ignoreMe IN CASE WHEN IsFDARegulatedDevice='No' THEN [1] ELSE [] END |
MERGE(ct)-[:IS_FDA_REGULATED_DEVICE]->(r))
;
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
with value.StudyFieldsResponse.NStudiesFound as NStudies, RANGE(0,(value.StudyFieldsResponse.NStudiesFound/1000)) as nloop
UNWIND nloop as i
with range(1+1000*i,1000+1000*i,999) as RANGES
Expand All @@ -169,7 +170,7 @@ UNWIND study_metadata.HasExpandedAccess as HasExpandedAccess
FOREACH(ignoreMe IN CASE WHEN HasExpandedAccess='No' THEN [1] ELSE [] END |
MERGE(ct)-[:HAS_EXPANDED_ACCESS]->(r))
;
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
with value.StudyFieldsResponse.NStudiesFound as NStudies, RANGE(0,(value.StudyFieldsResponse.NStudiesFound/1000)) as nloop
UNWIND nloop as i
with range(1+1000*i,1000+1000*i,999) as RANGES
Expand All @@ -179,17 +180,20 @@ with value.StudyFieldsResponse.StudyFields as coll unwind coll as study_metadata
UNWIND study_metadata.NCTId as Id
match(ct:ClinicalTrial{NCTId:Id})
UNWIND study_metadata.BriefSummary as BriefSummary
UNWIND study_metadata.DetailedDescription as DetailedDescription
MERGE (t:Description{summary:BriefSummary,detailed:DetailedDescription}) MERGE (ct)-[:HAS_DESCRIPTION]->(t)
with ct, study_metadata
MERGE (ct)-[:HAS_DESCRIPTION]->(t:Description{summary:BriefSummary})
with ct,t, study_metadata
UNWIND study_metadata.Condition as Condition
MERGE (c:Condition{disease:Condition})
MERGE (ct)-[:IS_STUDYING]->(c)
with ct, c, t,study_metadata
UNWIND study_metadata.Keyword as Keyword
MERGE (c:Condition{disease:Condition})
MERGE(k:Keyword{word:Keyword})
MERGE (ct)-[:IS_STUDYING]->(c)
MERGE (c)-[:HAS_KEYWORD]->(k)
MERGE(ct)-[:IS_STUDYING]->(k)
with ct, t, study_metadata
UNWIND study_metadata.DetailedDescription as DetailedDescription
set t.description=DetailedDescription
;
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
with value.StudyFieldsResponse.NStudiesFound as NStudies, RANGE(0,(value.StudyFieldsResponse.NStudiesFound/1000)) as nloop
UNWIND nloop as i
with range(1+1000*i,1000+1000*i,999) as RANGES
Expand All @@ -202,7 +206,7 @@ match(ct:ClinicalTrial{NCTId:Id})
MERGE(m:Design{model:Model})
MERGE (ct)-[:HAS_STUDY_DESIGN]->(m)
;
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
with value.StudyFieldsResponse.NStudiesFound as NStudies, RANGE(0,(value.StudyFieldsResponse.NStudiesFound/1000)) as nloop
UNWIND nloop as i
with range(1+1000*i,1000+1000*i,999) as RANGES
Expand All @@ -215,7 +219,7 @@ match(ct:ClinicalTrial{NCTId:Id})
MERGE(t:ObservationPeriod{time:DesignTimePerspective})
MERGE (ct)-[:HAS_OBSERVATION_PERIOD]->(t)
;
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
with value.StudyFieldsResponse.NStudiesFound as NStudies, RANGE(0,(value.StudyFieldsResponse.NStudiesFound/1000)) as nloop
UNWIND nloop as i
with range(1+1000*i,1000+1000*i,999) as RANGES
Expand All @@ -231,7 +235,7 @@ with b, study_metadata
UNWIND study_metadata.BioSpecDescription as BioSpecDescription
SET b.description=BioSpecDescription
;
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
with value.StudyFieldsResponse.NStudiesFound as NStudies, RANGE(0,(value.StudyFieldsResponse.NStudiesFound/1000)) as nloop
UNWIND nloop as i
with range(1+1000*i,1000+1000*i,999) as RANGES
Expand All @@ -249,7 +253,7 @@ ON CREATE SET a.type=study_metadata.ArmGroupType[i]
MERGE(a)-[:BELONGS_TO_MODEL]->(m)
)
;
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
with value.StudyFieldsResponse.NStudiesFound as NStudies, RANGE(0,(value.StudyFieldsResponse.NStudiesFound/1000)) as nloop
UNWIND nloop as i
with range(1+1000*i,1000+1000*i,999) as RANGES
Expand All @@ -266,7 +270,7 @@ ON CREATE SET e.description=study_metadata.InterventionDescription[i]
ON CREATE SET e.type=study_metadata.InterventionType[i]
)
;
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
with value.StudyFieldsResponse.NStudiesFound as NStudies, RANGE(0,(value.StudyFieldsResponse.NStudiesFound/1000)) as nloop
UNWIND nloop as i
with range(1+1000*i,1000+1000*i,999) as RANGES
Expand All @@ -282,7 +286,7 @@ ON CREATE SET a.description=study_metadata.PrimaryOutcomeDescription[i]
ON CREATE SET a.time=study_metadata.PrimaryOutcomeTimeFrame[i]
)
;
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
with value.StudyFieldsResponse.NStudiesFound as NStudies, RANGE(0,(value.StudyFieldsResponse.NStudiesFound/1000)) as nloop
UNWIND nloop as i
with range(1+1000*i,1000+1000*i,999) as RANGES
Expand All @@ -298,7 +302,7 @@ ON CREATE SET a.description=study_metadata.SecondaryOutcomeDescription[i]
ON CREATE SET a.time=study_metadata.SecondaryOutcomeTimeFrame[i]
)
;
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
with value.StudyFieldsResponse.NStudiesFound as NStudies, RANGE(0,(value.StudyFieldsResponse.NStudiesFound/1000)) as nloop
UNWIND nloop as i
with range(1+1000*i,1000+1000*i,999) as RANGES
Expand All @@ -314,7 +318,7 @@ ON CREATE SET a.description=study_metadata.OtherOutcomeDescription[i]
ON CREATE SET a.time=study_metadata.OtherOutcomeTimeFrame[i]
)
;
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
with value.StudyFieldsResponse.NStudiesFound as NStudies, RANGE(0,(value.StudyFieldsResponse.NStudiesFound/1000)) as nloop
UNWIND nloop as i
with range(1+1000*i,1000+1000*i,999) as RANGES
Expand All @@ -328,7 +332,7 @@ UNWIND study_metadata.SamplingMethod as SamplingMethod
MERGE (ct)-[:HAS_STUDY_POPULATION]->(p:StudyPopulation{name:StudyPopulation})
ON CREATE SET p.sampling=SamplingMethod
;
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
with value.StudyFieldsResponse.NStudiesFound as NStudies, RANGE(0,(value.StudyFieldsResponse.NStudiesFound/1000)) as nloop
UNWIND nloop as i
with range(1+1000*i,1000+1000*i,999) as RANGES
Expand All @@ -344,7 +348,7 @@ with ct, g, study_metadata
UNWIND study_metadata.GenderDescription as GenderDescription
set g.description=GenderDescription
;
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
with value.StudyFieldsResponse.NStudiesFound as NStudies, RANGE(0,(value.StudyFieldsResponse.NStudiesFound/1000)) as nloop
UNWIND nloop as i
with range(1+1000*i,1000+1000*i,999) as RANGES
Expand All @@ -357,7 +361,7 @@ UNWIND study_metadata.MinimumAge as MinAge
UNWIND study_metadata.MaximumAge as MaxAge
MERGE (ct)-[:INCLUDES_AGE_RANGE]->(a:AgeRange{minAge:MinAge,maxAge:MaxAge})
;
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
with value.StudyFieldsResponse.NStudiesFound as NStudies, RANGE(0,(value.StudyFieldsResponse.NStudiesFound/1000)) as nloop
UNWIND nloop as i
with range(1+1000*i,1000+1000*i,999) as RANGES
Expand All @@ -376,7 +380,7 @@ with study_metadata, ct, Inclusion, Exclusion, RANGE(1,size(Exclusion)-1) as nex
FOREACH(i in nexcl |
MERGE(ct)-[:HAS_EXCLUSION_CRITERIA]->(excl:ExclusionCriteria{criteria:Exclusion[i]}))
;
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
with value.StudyFieldsResponse.NStudiesFound as NStudies, RANGE(0,(value.StudyFieldsResponse.NStudiesFound/1000)) as nloop
UNWIND nloop as i
with range(1+1000*i,1000+1000*i,999) as RANGES
Expand All @@ -392,12 +396,7 @@ with study_metadata,c
UNWIND study_metadata.CentralContactEmail as Email
SET c.email=Email
;
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
with value.StudyFieldsResponse.NStudiesFound as NStudies, RANGE(0,(value.StudyFieldsResponse.NStudiesFound/1000)) as nloop
UNWIND nloop as i
with range(1+1000*i,1000+1000*i,999) as RANGES
with RANGES, RANGES[1] as urange, RANGES[0] as lrange
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId,LocationFacility,LocationCity,LocationState,LocationCountry&min_rnk='+lrange+'&max_rnk='+urange+'&fmt=json') yield value
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
with value.StudyFieldsResponse.NStudiesFound as NStudies, RANGE(0,(value.StudyFieldsResponse.NStudiesFound/1000)) as nloop
UNWIND nloop as i
with range(1+1000*i,1000+1000*i,999) as RANGES
Expand All @@ -421,7 +420,7 @@ FOREACH(i in ncity |
MERGE(ci)-[:LOCATED_IN]->(c)
)
;
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
call apoc.load.json('https://clinicaltrials.gov/api/query/study_fields?expr=COVID+AND+AREA%5BStudyType%5DObservational&fields=NCTId&fmt=json&max_rnk=1000') yield value
with value.StudyFieldsResponse.NStudiesFound as NStudies, RANGE(0,(value.StudyFieldsResponse.NStudiesFound/1000)) as nloop
UNWIND nloop as i
with range(1+1000*i,1000+1000*i,999) as RANGES
Expand All @@ -445,7 +444,7 @@ UNWIND study_metadata.SeeAlsoLinkURL as URL
MERGE(l:Link{url:URL})
MERGE(ct)-[:REFERS_TO_URL]->(l)
;
match(i:InclusionCriteria) where i.criteria in ['-', 'none'] DETACH DELETE i
match(i:InclusionCriteria) where i.criteria in ['-', 'none'] DETACH DELETE i
;
match(e:ExclusionCriteria) where e.criteria in ['-', 'none'] DETACH DELETE e
match(e:ExclusionCriteria) where e.criteria in ['-', 'none'] DETACH DELETE e
;

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