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Colabfold on OSCAR

Overview

ColabFold is a fast, powerful algorithm based on Google's AlphaFold2 designed to predict a protein's 3D structure from its protein sequence. Using slightly different methods in MSA (multiple-sequence alignment, ColabFold runs up to 3-5x faster than the original AlphaFold with comparable results.

Getting Started

These instructions will get you a working installation of ColabFold on Brown's HPC cluster OSCAR.

Prerequisites

This installation requires access to a GPU on OSCAR.

Installing

Tests

Deployment

Contributing

Release History

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