Revisions of the new_inh_model section (#115)

* Some revisions of the new_inh_model section * Update contributor_table.md for Francesco and Alberto * methods_updated (#117) * introduction_updated (#118) * Create new_inh_model\ (folder) (#121) * Create text.md (#122) * Delete paper/sections/new_inh_model\ (#123) * Update paper.bib (#124) * Update text.md (#125) * Patch 23 (#126) * Update text.md * Add files via upload * Update paper.bib * Update text.md * Update text.md * Update text.md * Update text.md * Update text.md * Update text.md * Update text.md * Update text.md * Update text.md * Update text.md * Update text.md * Update text.md * Update text.md * Update text.md * Add files via upload * Update text.md * Add files via upload * Delete paper/sections/new_inh_model/blocked_inh.jpg * Delete paper/sections/new_inh_model/lso_mso.jpg * Update text.md * Update text.md * Update text.md * Update text.md * Update text.md * Update text.md * Update text.md * Update text.md * Update text.md * Update text.md * Update text.md * Some corrections to the text * Merge main (#127) * Update contributor_table.md (#120) * Fix typo in Delays.md (#119) --------- Co-authored-by: saraevers <[email protected]> Co-authored-by: Pietro Monticone <[email protected]> * Finished revision of the section inhibition model * added references (#128) * added references * Update inhibition_model.md * Update paper.bib * Update paper.bib * Update inhibition_model.md * Fixing last reference * Update contributor_table.md * Update inhibition_model.md * Add files via upload * Update contributor_table.md * Update inhibition_model.md * Update inhibition_model.md * Update inhibition_model.md * Update inhibition_model.md * Patch 2 (#130) * Update inhibition_model.md * Add files via upload * Update contributor_table.md * Update inhibition_model.md * Update inhibition_model.md * Update inhibition_model.md * Update inhibition_model.md * Update inhibition_model.md * Delete research/5-new_inh_model.ipynb * Add files via upload * added ORCID * merging * move documentation of functions in MD cell * Update notebook (#133) * Update notebook new_inh_model * Delete research/model.ipynb * Add files via upload * removed empty cell at the end of the notebook * Small improvements to the new_inh notebook Tested with newer version of NEST and python and added documentation on how to install NEST. * fixed broken links --------- Co-authored-by: Francesco De Santis <[email protected]> Co-authored-by: saraevers <[email protected]> Co-authored-by: Pietro Monticone <[email protected]> Co-authored-by: Dan Goodman <[email protected]>
comob-project · Jun 21, 2024 · e3482fe · e3482fe
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diff --git a/.github/.DS_Store b/.github/.DS_Store
diff --git a/paper/.DS_Store b/paper/.DS_Store
diff --git a/paper/paper.bib b/paper/paper.bib
diff --git a/paper/paper.md b/paper/paper.md
@@ -13,8 +13,9 @@ authors:
 
   - name: Francesco De Santis
     affiliations:
-      - NearLab, Politecnico di Milano
-
+      - Politecnico di Milano
+    orcid: 0009-0005-8393-9658
+
   - name: Tomas Fiers
     affiliations: 
       - University of Nottingham
@@ -69,9 +70,10 @@ authors:
 
   - name: Alberto Antonietti
     affiliations:
-      - NearLab, Politecnico di Milano
+      - Politecnico di Milano
+    orcid: 0000-0003-0388-6321
 
-  - name: Dan F. M. Goodman
+- name: Dan F. M. Goodman
     affiliations:
       - Imperial College London
     orcid: 0000-0003-1007-6474
@@ -134,7 +136,7 @@ In this section, each subsection is the detailed results as written up by the au
 ```{include} sections/basicmodel/basicmodel.md
 ```
 
-```{include} sections/new_inh_model.md
+```{include} sections/new_inh_model/inhibition_model.md
 ```
 
 ```{include} sections/delays/Delays.md

diff --git a/paper/sections/.DS_Store b/paper/sections/.DS_Store
diff --git a/paper/sections/contributor_table.md b/paper/sections/contributor_table.md
@@ -26,8 +26,8 @@ If you add a contribution, please use one of the following templates (see exampl
   - Conceived the project, wrote the paper, wrote and recorded the Cosyne tutorial. Conducted research ([](../research/3-Starting-Notebook.ipynb), [](../research/time-constant-solutions.ipynb)).
 * - Francesco De Santis
   - [\@francescodesantis](https://github.com/francescodesantis)
-  - Conducted research (TODO INCLUDE LINK), wrote the paper ([](#inh-model))
-* - Karim Habashy 
+  - (Conducted research ([](../research/new_inh_model.ipynb)) and wrote the paper ([](sections/new_inh_model/inhibition_model.md)))
+* - Karim Habashy
   - [\@KarimHabashy](https://github.com/KarimHabashy)
   - Conducted research ([](../research/Learning_delays.ipynb), [](../research/Learning_delays_major_edit2.ipynb), [](../research/Solving_problem_with_delay_learning.ipynb)), wrote the paper ([](#delay-section)), project management ([](../research/4-Quick_Start.ipynb))
 * - Mingxuan Hong
@@ -71,7 +71,7 @@ If you add a contribution, please use one of the following templates (see exampl
   - (TODO)
 * - [Alberto Antonietti](https://www.deib.polimi.it/eng/people/details/669646)
   - [\@alberto-antonietti](https://github.com/alberto-antonietti)
-  - Supervised Francesco De Santis, wrote the paper ([](#inh-model)).
+  - Supervised Francesco De Santis, wrote the paper ([](sections/new_inh_model/inhibition_model.md)).
 * - Lavínia Takarabe
   - [\@laviniamitiko](https://github.com/laviniamitiko)
   - (TODO)

diff --git a/paper/sections/new_inh_model.md b/paper/sections/new_inh_model.md
diff --git a/paper/sections/new_inh_model/blocked_inh.png b/paper/sections/new_inh_model/blocked_inh.png
diff --git a/paper/sections/new_inh_model/inhibition_model.md b/paper/sections/new_inh_model/inhibition_model.md
diff --git a/paper/sections/new_inh_model/lso.jpg b/paper/sections/new_inh_model/lso.jpg
diff --git a/paper/sections/new_inh_model/lso_mso.png b/paper/sections/new_inh_model/lso_mso.png
diff --git a/paper/sections/new_inh_model/network_diagram.png b/paper/sections/new_inh_model/network_diagram.png
diff --git a/paper/sections/new_inh_model/peaks.jpg b/paper/sections/new_inh_model/peaks.jpg
diff --git a/research/.DS_Store b/research/.DS_Store