deploy: 9999023

_next/data/rZnY3L2Oc7ZGfRomuo7oM/notes/04lw3qyb0p7gg9jdp52lfll.json

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+{"pageProps":{"note":{"fname":"reproducibility","stub":true,"vault":{"fsPath":"vault"},"schemaStub":false,"type":"note","updated":1697113875293,"created":1697113875293,"id":"04lw3qyb0p7gg9jdp52lfll","desc":"","links":[],"anchors":{},"children":["rad1xx96rdtzviomc9td7xa"],"parent":"QvYK9hGbCvPpEfSRYhV8j","data":{},"title":"Reproducibility"},"body":"<h1 id=\"reproducibility\"><a aria-hidden=\"true\" class=\"anchor-heading icon-link\" href=\"#reproducibility\"></a>Reproducibility</h1>\n<hr>\n<strong>Children</strong>\n<ol>\n<li><a href=\"/commons-dws-public/notes/rad1xx96rdtzviomc9td7xa\">Templates</a></li>\n</ol>","noteIndex":{"id":"QvYK9hGbCvPpEfSRYhV8j","title":"Welcome to the COMMONS Lab Open Dendron","desc":"","updated":1693056226815,"created":1630130450048,"custom":{"nav_order":0,"permalink":"/"},"fname":"root","type":"note","vault":{"fsPath":"vault"},"contentHash":"20f67df3dd870fc450a162c202c9ff41","links":[{"type":"wiki","from":{"fname":"root","id":"QvYK9hGbCvPpEfSRYhV8j","vaultName":"vault"},"value":"open-notebook.commons.setup","position":{"start":{"line":43,"column":118,"offset":1871},"end":{"line":43,"column":149,"offset":1902},"indent":[]},"xvault":false,"sameFile":false,"to":{"fname":"open-notebook.commons.setup"}}],"anchors":{"what-is-this-note":{"type":"header","text":"What is this note","value":"what-is-this-note","line":16,"column":0,"depth":2},"tutorial":{"type":"header","text":"Tutorial","value":"tutorial","line":20,"column":0,"depth":2},"dendron":{"type":"header","text":"Dendron.","value":"dendron","line":22,"column":0,"depth":3},"what-is-dendron-":{"type":"header","text":"What is Dendron ?","value":"what-is-dendron-","line":24,"column":0,"depth":4},"where-to-get-more-info-on-dendron-":{"type":"header","text":"Where to get more info on Dendron ?","value":"where-to-get-more-info-on-dendron-","line":30,"column":0,"depth":4},"concrete-steps-to-access-and-contribute-to-the-dbgi-dendron":{"type":"header","text":"Concrete steps to access and contribute to the DBGI Dendron","value":"concrete-steps-to-access-and-contribute-to-the-dbgi-dendron","line":35,"column":0,"depth":4},"questions-comments-suggestions-":{"type":"header","text":"Questions, comments, suggestions ?","value":"questions-comments-suggestions-","line":52,"column":0,"depth":2}},"children":["e4ul30admmxm9ilxfq275cq","6ooxuf27zzf3grb14o18qf2","ih6vyup3yre4m9woc9ldl7k","vDTgZL9UHWqYtBFdtD3vK","jldFUSJGjDf1mFH8c2yUI","2rvdf4t5qnx5hqjj29bojcc","gvdyfgvq0z08fcfaqzmhtjo","46d1odkovrpdi6g16992phy","hpnaglyhnb48vuiniqecnqf","2cxr093kvrg4jojokwgqrbj","w75krbmkkvla3hwd66hn5bh","sk4m9gq7vz2t9phcxlxvqpw","43p60vv8btyhaclugl93jok","wj0i9czxvt4v0b674nb8501","ovslc641d0h00s16tf6kl8w","59ftsVxFXXM9bB43vfKwK","nmnpsy2e1rwqnqgurogi2u6","ho5ii5nkx60dv5xc255tkjr","1msy0rssc0koh8nyfuzg4tn","tm7gu3sa1qahnzk6jrn9ij5","04lw3qyb0p7gg9jdp52lfll","9dvzhrnw112wdwr1gfwxory","se51lfoq2o3akpf0xf4emm2","lcbe9qnd0qk0vdjmbpvm33b"],"parent":null,"data":{},"body":"\n![](/assets/images/allard-lab.jpg)\n\nWelcome the the COMMONS Lab Open Dendron !\n\nIn the [COMMONS Lab](https://www.unifr.ch/bio/en/groups/allard/) we intent to follow the [Open Notebook Science](https://en.wikipedia.org/wiki/Open-notebook_science) approach to document our research.\n\nFor this we use the [Dendron](https://www.dendron.so/) system as a mean to efficiently capture notes and publish them.\n\n## What is this note\n\nThis note is a succinct tutorial note aiming to get you started in the use of the COMMONS Lab Dendron.\n\n## Tutorial\n\n### Dendron. \n\n#### What is Dendron ?\n\n> Dendron is an open-source, local-first, markdown-based, note-taking tool. Think of it as a cache for everything that you care about - if you've spent more then five minutes solving a problem, you should never spent any more time solving the same exact problem.\n> \n> Dendron is a knowledge base built by and for developers and integrates natively with IDEs like VS Code and VSCodium.\n\n#### Where to get more info on Dendron ?\n\n- You can get more information in the Dendron system at the official website www.dendron.so\n- All the Dendron documentation is hosted here https://wiki.dendron.so/. It is, obviously, a Dendron itself.\n\n#### Concrete steps to access and contribute to the DBGI Dendron\n\n1. Install [VSCode](https://code.visualstudio.com/download)\n2. Install [Dendron](https://marketplace.visualstudio.com/items?itemName=dendron.dendron) from the VSCode marketplace \n3. Clone the COMMONS Dendron repo\n\n    In your terminal\n    ```\n    git clone https://github.com/commons-research/commons-dws-public.git\n    ```\n4. In VSCode open (File/Open) the cloned repository.\n5. Voila ! You should now be in the COMMONS Lab Open Dendron.\n\nFeel free to explore and contribute.\nA first, important step could be to configure VSCode so that you can easily add a daily note. See steps described at [[open-notebook.commons.setup]]\n\n\n## Questions, comments, suggestions ?\n\nFeel free to contribute here https://github.com/orgs/commons-research/discussions\n\n"},"collectionChildren":null,"customHeadContent":null,"config":{"version":5,"dev":{"enablePreviewV2":true},"commands":{"lookup":{"note":{"selectionMode":"extract","confirmVaultOnCreate":false,"leaveTrace":false,"bubbleUpCreateNew":true,"vaultSelectionModeOnCreate":"smart","fuzzThreshold":0.2}},"insertNote":{"initialValue":"templates"},"insertNoteLink":{"aliasMode":"none","enableMultiSelect":false},"insertNoteIndex":{"enableMarker":false},"randomNote":{},"copyNoteLink":{"aliasMode":"title"},"templateHierarchy":"template"},"workspace":{"vaults":[{"fsPath":"vault"}],"journal":{"dailyDomain":"daily","name":"journal","dateFormat":"y.MM.dd","addBehavior":"childOfDomain"},"scratch":{"name":"scratch","dateFormat":"y.MM.dd.HHmmss","addBehavior":"asOwnDomain"},"graph":{"zoomSpeed":1,"createStub":false},"enableAutoCreateOnDefinition":false,"enableXVaultWikiLink":false,"enableRemoteVaultInit":true,"workspaceVaultSyncMode":"noCommit","enableAutoFoldFrontmatter":false,"maxPreviewsCached":10,"maxNoteLength":204800,"task":{"name":"","dateFormat":"","addBehavior":"childOfCurrent","statusSymbols":{"":" ","wip":"w","done":"x","assigned":"a","moved":"m","blocked":"b","delegated":"l","dropped":"d","pending":"y"},"prioritySymbols":{"H":"high","M":"medium","L":"low"},"todoIntegration":false,"createTaskSelectionType":"selection2link","taskCompleteStatus":["done","x"]},"enableUserTags":true,"enableHashTags":true,"dendronVersion":"0.112.0","enableEditorDecorations":true,"enableFullHierarchyNoteTitle":false},"preview":{"enableFMTitle":true,"enableNoteTitleForLink":true,"enableMermaid":true,"enablePrettyRefs":true,"enableKatex":true,"automaticallyShowPreview":false,"enableFrontmatterTags":true,"enableHashesForFMTags":false},"publishing":{"enableFMTitle":true,"enableNoteTitleForLink":true,"enableMermaid":true,"enablePrettyRefs":true,"enableKatex":true,"assetsPrefix":"/commons-dws-public","copyAssets":true,"siteHierarchies":["root"],"enableSiteLastModified":true,"siteRootDir":"docs","siteUrl":"https://commons-research.github.io","enableFrontmatterTags":true,"enableHashesForFMTags":false,"enableRandomlyColoredTags":true,"duplicateNoteBehavior":{"action":"useVault","payload":["vault"]},"writeStubs":false,"seo":{"title":"COMMONS DWS Public","description":"Personal knowledge space"},"github":{"enableEditLink":true,"editLinkText":"Click here to edit this page on Github !","editBranch":"main","editViewMode":"edit","editRepository":"https://github.com/commons-research/commons-dws-public"},"enablePrettyLinks":true,"enableTaskNotes":true,"siteFaviconPath":"favicon.ico","siteIndex":"root","searchMode":"lookup"}}},"__N_SSG":true}

_next/data/rZnY3L2Oc7ZGfRomuo7oM/notes/0bbrh1f7qp90hgvpc53cyl6.json

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+{"pageProps":{"note":{"fname":"open-notebook.commons.sguetchueng.2023.03","stub":true,"vault":{"fsPath":"vault"},"schemaStub":false,"type":"note","updated":1697113875317,"created":1697113875317,"id":"0bbrh1f7qp90hgvpc53cyl6","desc":"","links":[],"anchors":{},"children":["v3p1zsqg63yki44spmn3zqa","e090r2p38a55v6gv4uuezue","we641vahkb0idh203rsjzh2"],"parent":"ip6a1v46dbkuunivqxxrfhn","data":{},"title":"03"},"body":"<h1 id=\"03\"><a aria-hidden=\"true\" class=\"anchor-heading icon-link\" href=\"#03\"></a>03</h1>\n<hr>\n<strong>Children</strong>\n<ol>\n<li><a href=\"/commons-dws-public/notes/v3p1zsqg63yki44spmn3zqa\">02</a></li>\n<li><a href=\"/commons-dws-public/notes/e090r2p38a55v6gv4uuezue\">2023-03-03</a></li>\n<li><a href=\"/commons-dws-public/notes/we641vahkb0idh203rsjzh2\">2023-03-20</a></li>\n</ol>","noteIndex":{"id":"QvYK9hGbCvPpEfSRYhV8j","title":"Welcome to the COMMONS Lab Open Dendron","desc":"","updated":1693056226815,"created":1630130450048,"custom":{"nav_order":0,"permalink":"/"},"fname":"root","type":"note","vault":{"fsPath":"vault"},"contentHash":"20f67df3dd870fc450a162c202c9ff41","links":[{"type":"wiki","from":{"fname":"root","id":"QvYK9hGbCvPpEfSRYhV8j","vaultName":"vault"},"value":"open-notebook.commons.setup","position":{"start":{"line":43,"column":118,"offset":1871},"end":{"line":43,"column":149,"offset":1902},"indent":[]},"xvault":false,"sameFile":false,"to":{"fname":"open-notebook.commons.setup"}}],"anchors":{"what-is-this-note":{"type":"header","text":"What is this note","value":"what-is-this-note","line":16,"column":0,"depth":2},"tutorial":{"type":"header","text":"Tutorial","value":"tutorial","line":20,"column":0,"depth":2},"dendron":{"type":"header","text":"Dendron.","value":"dendron","line":22,"column":0,"depth":3},"what-is-dendron-":{"type":"header","text":"What is Dendron ?","value":"what-is-dendron-","line":24,"column":0,"depth":4},"where-to-get-more-info-on-dendron-":{"type":"header","text":"Where to get more info on Dendron ?","value":"where-to-get-more-info-on-dendron-","line":30,"column":0,"depth":4},"concrete-steps-to-access-and-contribute-to-the-dbgi-dendron":{"type":"header","text":"Concrete steps to access and contribute to the DBGI Dendron","value":"concrete-steps-to-access-and-contribute-to-the-dbgi-dendron","line":35,"column":0,"depth":4},"questions-comments-suggestions-":{"type":"header","text":"Questions, comments, suggestions ?","value":"questions-comments-suggestions-","line":52,"column":0,"depth":2}},"children":["e4ul30admmxm9ilxfq275cq","6ooxuf27zzf3grb14o18qf2","ih6vyup3yre4m9woc9ldl7k","vDTgZL9UHWqYtBFdtD3vK","jldFUSJGjDf1mFH8c2yUI","2rvdf4t5qnx5hqjj29bojcc","gvdyfgvq0z08fcfaqzmhtjo","46d1odkovrpdi6g16992phy","hpnaglyhnb48vuiniqecnqf","2cxr093kvrg4jojokwgqrbj","w75krbmkkvla3hwd66hn5bh","sk4m9gq7vz2t9phcxlxvqpw","43p60vv8btyhaclugl93jok","wj0i9czxvt4v0b674nb8501","ovslc641d0h00s16tf6kl8w","59ftsVxFXXM9bB43vfKwK","nmnpsy2e1rwqnqgurogi2u6","ho5ii5nkx60dv5xc255tkjr","1msy0rssc0koh8nyfuzg4tn","tm7gu3sa1qahnzk6jrn9ij5","04lw3qyb0p7gg9jdp52lfll","9dvzhrnw112wdwr1gfwxory","se51lfoq2o3akpf0xf4emm2","lcbe9qnd0qk0vdjmbpvm33b"],"parent":null,"data":{},"body":"\n![](/assets/images/allard-lab.jpg)\n\nWelcome the the COMMONS Lab Open Dendron !\n\nIn the [COMMONS Lab](https://www.unifr.ch/bio/en/groups/allard/) we intent to follow the [Open Notebook Science](https://en.wikipedia.org/wiki/Open-notebook_science) approach to document our research.\n\nFor this we use the [Dendron](https://www.dendron.so/) system as a mean to efficiently capture notes and publish them.\n\n## What is this note\n\nThis note is a succinct tutorial note aiming to get you started in the use of the COMMONS Lab Dendron.\n\n## Tutorial\n\n### Dendron. \n\n#### What is Dendron ?\n\n> Dendron is an open-source, local-first, markdown-based, note-taking tool. Think of it as a cache for everything that you care about - if you've spent more then five minutes solving a problem, you should never spent any more time solving the same exact problem.\n> \n> Dendron is a knowledge base built by and for developers and integrates natively with IDEs like VS Code and VSCodium.\n\n#### Where to get more info on Dendron ?\n\n- You can get more information in the Dendron system at the official website www.dendron.so\n- All the Dendron documentation is hosted here https://wiki.dendron.so/. It is, obviously, a Dendron itself.\n\n#### Concrete steps to access and contribute to the DBGI Dendron\n\n1. Install [VSCode](https://code.visualstudio.com/download)\n2. Install [Dendron](https://marketplace.visualstudio.com/items?itemName=dendron.dendron) from the VSCode marketplace \n3. Clone the COMMONS Dendron repo\n\n    In your terminal\n    ```\n    git clone https://github.com/commons-research/commons-dws-public.git\n    ```\n4. In VSCode open (File/Open) the cloned repository.\n5. Voila ! You should now be in the COMMONS Lab Open Dendron.\n\nFeel free to explore and contribute.\nA first, important step could be to configure VSCode so that you can easily add a daily note. See steps described at [[open-notebook.commons.setup]]\n\n\n## Questions, comments, suggestions ?\n\nFeel free to contribute here https://github.com/orgs/commons-research/discussions\n\n"},"collectionChildren":null,"customHeadContent":null,"config":{"version":5,"dev":{"enablePreviewV2":true},"commands":{"lookup":{"note":{"selectionMode":"extract","confirmVaultOnCreate":false,"leaveTrace":false,"bubbleUpCreateNew":true,"vaultSelectionModeOnCreate":"smart","fuzzThreshold":0.2}},"insertNote":{"initialValue":"templates"},"insertNoteLink":{"aliasMode":"none","enableMultiSelect":false},"insertNoteIndex":{"enableMarker":false},"randomNote":{},"copyNoteLink":{"aliasMode":"title"},"templateHierarchy":"template"},"workspace":{"vaults":[{"fsPath":"vault"}],"journal":{"dailyDomain":"daily","name":"journal","dateFormat":"y.MM.dd","addBehavior":"childOfDomain"},"scratch":{"name":"scratch","dateFormat":"y.MM.dd.HHmmss","addBehavior":"asOwnDomain"},"graph":{"zoomSpeed":1,"createStub":false},"enableAutoCreateOnDefinition":false,"enableXVaultWikiLink":false,"enableRemoteVaultInit":true,"workspaceVaultSyncMode":"noCommit","enableAutoFoldFrontmatter":false,"maxPreviewsCached":10,"maxNoteLength":204800,"task":{"name":"","dateFormat":"","addBehavior":"childOfCurrent","statusSymbols":{"":" ","wip":"w","done":"x","assigned":"a","moved":"m","blocked":"b","delegated":"l","dropped":"d","pending":"y"},"prioritySymbols":{"H":"high","M":"medium","L":"low"},"todoIntegration":false,"createTaskSelectionType":"selection2link","taskCompleteStatus":["done","x"]},"enableUserTags":true,"enableHashTags":true,"dendronVersion":"0.112.0","enableEditorDecorations":true,"enableFullHierarchyNoteTitle":false},"preview":{"enableFMTitle":true,"enableNoteTitleForLink":true,"enableMermaid":true,"enablePrettyRefs":true,"enableKatex":true,"automaticallyShowPreview":false,"enableFrontmatterTags":true,"enableHashesForFMTags":false},"publishing":{"enableFMTitle":true,"enableNoteTitleForLink":true,"enableMermaid":true,"enablePrettyRefs":true,"enableKatex":true,"assetsPrefix":"/commons-dws-public","copyAssets":true,"siteHierarchies":["root"],"enableSiteLastModified":true,"siteRootDir":"docs","siteUrl":"https://commons-research.github.io","enableFrontmatterTags":true,"enableHashesForFMTags":false,"enableRandomlyColoredTags":true,"duplicateNoteBehavior":{"action":"useVault","payload":["vault"]},"writeStubs":false,"seo":{"title":"COMMONS DWS Public","description":"Personal knowledge space"},"github":{"enableEditLink":true,"editLinkText":"Click here to edit this page on Github !","editBranch":"main","editViewMode":"edit","editRepository":"https://github.com/commons-research/commons-dws-public"},"enablePrettyLinks":true,"enableTaskNotes":true,"siteFaviconPath":"favicon.ico","siteIndex":"root","searchMode":"lookup"}}},"__N_SSG":true}