-
Notifications
You must be signed in to change notification settings - Fork 2
Workshop Content
richard morris edited this page Jun 25, 2024
·
2 revisions
This workshop consists of four sections.
Note There is no separate wiki page for this section.
Understanding the Critical Impact of Experimental Design.
- How do different properties of sequence data influence method development and subsequent conclusions drawn from experiments?
- Exploring other key considerations in experimental design.
Efficient Strategies for Data Retrieval from Sequence Data Sources.
- How to download a collection of GenBank sequences using a list of their identifiers.
- How to retrieve valuable data, including alignments, from Ensembl using the command line with EnsemblLite.
Building Robust Data-Wrangling Pipelines
- Develop strategies for data exploration, and learn how to use the outcomes of data exploration for the construction of well-informed data-wrangling pipelines.
- Learn how these pipelines can be integrated into the alignment process, ensuring automated data provenance and reproducibility.
Practical Problem-Solving with cogent3
- Engage in hands-on problem-solving with a real-world scenario.
- Apply knowledge from the workshop to devise and implement custom solutions using
cogent3.